RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 CTHRC1Q96CG8 243 aa12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 L3HYPDHQ96EM0 354 aa12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 PROK2Q9HC23 129 aa12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 SIRT5Q9NXA8 310 aa12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 EHD3Q9NZN3 535 aa12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 PSMC3IPQ9P2W1 217 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 KCNN3Q9UGI6 736 aa12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 ZNF639Q9UID6 485 aa12.89□□□□□ -0.35
DNMT3A-211ENST00000474887 LRRC3CA6NJW4 275 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 HSPB2A8KAH6 182 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 DLX3O60479 287 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 HPNP05981 417 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 RHOXF2BP0C7M4 288 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 MSX1P28360 303 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 GCKP35557 465 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 PPICP45877 212 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 HEPACAMQ14CZ8 416 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 HSPB2Q16082 182 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 PRICKLE4Q2TBC4 344 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 UNC50Q53HI1 259 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 C1orf185Q5T7R7 199 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 SLC30A6Q6NXT4 461 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 OR10Q1Q8NGQ4 319 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 UHMK1Q8TAS1 419 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 ZNF675Q8TD23 568 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 NTNG2Q96CW9 530 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 LRRC46Q96FV0 321 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 TMEM41AQ96HV5 264 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 METTL2AQ96IZ6 378 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 LCORQ96JN0 433 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 FARSBQ9NSD9 589 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 GIMAP4Q9NUV9 329 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 TMEM216Q9P0N5 145 aa12.88□□□□□ -0.35
DNMT3A-211ENST00000474887 CCDC168Q8NDH2 2452 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 TO15178 435 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ABCB7O75027 752 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ERAL1O75616 437 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 PPM1BO75688 479 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 SLITRK5O94991 958 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 OR4F21O95013 312 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ESRRBO95718 433 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ABCB1P08183 1280 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 RFPL3SP0C7P2 107 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 GPX3P22352 226 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ABCD3P28288 659 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 GCAP28676 217 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 HMOX2P30519 316 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 CASP3P42574 277 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 CCT5P48643 541 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 CDK9P50750 372 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 TFF3Q07654 80 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ACSM2AQ08AH3 577 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 MGAT2Q10469 447 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 SLC29A2Q14542 456 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 NHSL2Q5HYW2 709 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 PRAMEF20Q5VT98 475 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 CES4AQ5XG92 561 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ACSM2BQ68CK6 577 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 TIGD3Q6B0B8 471 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 NCCRP1Q6ZVX7 275 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 DMRTC2Q8IXT2 367 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 C1orf52Q8N6N3 182 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 CDYL2Q8N8U2 506 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 FAM76AQ8TAV0 307 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 SREK1Q8WXA9 508 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 KLHL29Q96CT2 875 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ZNF681Q96N22 645 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 TXLNGYQ9BZA5 131 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 STMN4Q9H169 189 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 UBQLN3Q9H347 655 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 MAT2BQ9NZL9 334 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 BCAP29Q9UHQ4 241 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 ZNF225Q9UK10 706 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 LIPGQ9Y5X9 500 aa12.87□□□□□ -0.35
DNMT3A-211ENST00000474887 PHF3Q92576 2039 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 PPP6CO00743 305 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 EPPINO95925 133 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 CELA3AP09093 270 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 CT62P0C5K7 136 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 GDF1P27539 372 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 MPIP34949 423 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 TIMP3P35625 211 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 FEN1P39748 380 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 MASP1P48740 699 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 FBXW4P57775 412 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 TLE4Q04727 773 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 RTL6Q6ICC9 239 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 CCDC71Q8IV32 467 aaPredicted RBP12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 ULK2Q8IYT8 1036 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 RDH11Q8TC12 318 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 UCN3Q969E3 161 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 JSRP1Q96MG2 331 aaPredicted RBP12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 RILPQ96NA2 401 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 TMEM237Q96Q45 408 aa12.86□□□□□ -0.35
DNMT3A-211ENST00000474887 BRINP2Q9C0B6 783 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms