RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ATF3P18847 181 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SLC12A2P55011 1212 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TPD52P55327 224 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 H2BFSP57053 126 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 LSM3P62310 102 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 SOX4Q06945 474 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 SPOCK1Q08629 439 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 MLC1Q15049 377 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TOMM20Q15388 145 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SPHARQ15513 63 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 CEBPEQ15744 281 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 DUOXA1Q1HG43 343 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 LCN1P1Q5VSP4 162 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PGBD2Q6P3X8 592 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 CNIH2Q6PI25 160 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 C5orf46Q6UWT4 87 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 CFAP77Q6ZQR2 320 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TRMT1LQ7Z2T5 733 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 TMPRSS9Q7Z410 1059 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 VTCN1Q7Z7D3 282 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 LRRC28Q86X40 367 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 ARRDC1Q8N5I2 433 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 EID2Q8N6I1 236 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 VPS37AQ8NEZ2 397 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OR9A4Q8NGU2 314 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 CMTM7Q96FZ5 175 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 LMLNQ96KR4 655 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 FCRL2Q96LA5 508 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 PPM1MQ96MI6 270 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ZNF582Q96NG8 517 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 DCBLD2Q96PD2 775 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SLC38A3Q99624 504 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 MYOCQ99972 504 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ING2Q9H160 280 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 RIBC2Q9H4K1 309 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SLC32A1Q9H598 525 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SPC25Q9HBM1 224 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ZNF302Q9NR11 478 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 CYTL1Q9NRR1 136 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OPN4Q9UHM6 478 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ST6GALNAC2Q9UJ37 374 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 USP21Q9UK80 565 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ADAM30Q9UKF2 790 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 DHRS7Q9Y394 339 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 KCNK1O00180 336 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 RNASET2O00584 256 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 ADAMDEC1O15204 470 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TPST1O60507 370 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 GMDSO60547 372 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 EIF4EP06730 217 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 OR8U8P0C7N1 319 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ACP2P11117 423 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PSMB9P28065 219 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SOX18P35713 384 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ARHGDIAP52565 204 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SNRPD2P62316 118 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 PPP2CBP62714 309 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PPP2CAP67775 309 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 RAB40BQ12829 278 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PLD1Q13393 1074 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 C2orf68Q2NKX9 166 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SLC25A25Q6KCM7 469 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PAQR6Q6TCH4 344 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ZNF574Q6ZN55 896 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 SMIM5Q71RC9 77 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PLD3Q8IV08 490 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 P3H2Q8IVL5 708 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PHACTR4Q8IZ21 702 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TAB3Q8N5C8 712 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 KRTCAP2Q8N6L1 136 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 HORMAD2Q8N7B1 307 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OR4A4PQ8NGN8 299 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OR6X1Q8NH79 312 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 STAG3L4Q8TBR4 150 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 HS6ST2Q96MM7 605 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 C2orf88Q9BSF0 95 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 C16orf70Q9BSU1 422 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TEX101Q9BY14 249 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 MYOZ2Q9NPC6 264 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 HPF1Q9NWY4 346 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PLA2G2EQ9NZK7 142 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ASH2LQ9UBL3 628 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 HCN2Q9UL51 889 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 YBX2Q9Y2T7 364 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 ATG4BQ9Y4P1 393 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 EYSQ5T1H1 3165 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 A0A1B0GW64 132 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 A0A1W2PRQ8 180 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ANKRD20A5PA0PJZ0 165 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 YJEFN3A6XGL0 299 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 CLIC1O00299 241 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 MANBAO00462 879 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SCAMP1O15126 338 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 IRAK2O43187 625 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ARHGEF9O43307 516 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OR1I1O60431 355 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 RBBP9O75884 186 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ATG12O94817 140 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TRIM16O95361 564 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PPP1R3DO95685 299 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms