RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SGCZQ96LD1 299 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 AKTIPQ9H8T0 292 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 MEAF6Q9HAF1 191 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 TAS2R9Q9NYW1 312 aa12.73□□□□□ -0.37
USF1-205ENST00000473969 MARCOQ9UEW3 520 aaPredicted RBP12.73□□□□□ -0.37
USF1-205ENST00000473969 KALRNO60229 2985 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 GCN1Q92616 2671 aaKnown RBP12.72□□□□□ -0.37
USF1-205ENST00000473969 NME2P1O60361 137 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 TBX19O60806 448 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 OR6B1O95007 311 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 WISP1O95388 367 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 P04436 131 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 PRPS1L1P21108 318 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 NME2P22392 152 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 PTGER1P34995 402 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 TMED10P49755 219 aaKnown RBP12.72□□□□□ -0.37
USF1-205ENST00000473969 RPP38P78345 283 aaKnown RBP12.72□□□□□ -0.37
USF1-205ENST00000473969 OCRLQ01968 901 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 DUSP2Q05923 314 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 MGAT2Q10469 447 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 NXNQ6DKJ4 435 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 ANKRD26P1Q6NSI1 321 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 WDR75Q8IWA0 830 aaKnown RBP12.72□□□□□ -0.37
USF1-205ENST00000473969 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 GALNT11Q8NCW6 608 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 PIWIL2Q8TC59 973 aaKnown RBP12.72□□□□□ -0.37
USF1-205ENST00000473969 FAR1Q8WVX9 515 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 CTHRC1Q96CG8 243 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 HES7Q9BYE0 225 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 GLIPR2Q9H4G4 154 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 OLAHQ9NV23 265 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 DDX18Q9NVP1 670 aaKnown RBP12.72□□□□□ -0.37
USF1-205ENST00000473969 ZNF639Q9UID6 485 aa12.72□□□□□ -0.37
USF1-205ENST00000473969 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 PYCARD-AS1I3L0S3 204 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 TP53I11O14683 189 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 SCAMP2O15127 329 aaKnown RBP12.71□□□□□ -0.37
USF1-205ENST00000473969 PEX1O43933 1283 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 PLOD3O60568 738 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 CBX7O95931 251 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 CLPSP04118 112 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 G6PDP11413 515 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 S1PR1P21453 382 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 GPX3P22352 226 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 KRT20P35900 424 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 KCNC4Q03721 635 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 HSPB3Q12988 150 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 PTGR1Q14914 329 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 SLC22A10Q63ZE4 541 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 TMEM107Q6UX40 140 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.71□□□□□ -0.37
USF1-205ENST00000473969 GOLM1Q8NBJ4 401 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 PSD4Q8NDX1 1056 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 FAM13CQ8NE31 585 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 C17orf47Q8NEP4 570 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 ADIPOR1Q96A54 375 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 SPACA9Q96E40 222 aaPredicted RBP12.71□□□□□ -0.37
USF1-205ENST00000473969 MAGED4Q96JG8 741 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 LCORQ96JN0 433 aaPredicted RBP12.71□□□□□ -0.37
USF1-205ENST00000473969 AMDHD1Q96NU7 426 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 DPY30Q9C005 99 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 C3orf14Q9HBI5 128 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 SACM1LQ9NTJ5 587 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 ACSS1Q9NUB1 689 aaPredicted RBP12.71□□□□□ -0.37
USF1-205ENST00000473969 ASIC5Q9NY37 505 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 ATP6V1HQ9UI12 483 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 EXO1Q9UQ84 846 aaKnown RBP12.71□□□□□ -0.37
USF1-205ENST00000473969 NPFFR2Q9Y5X5 522 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.37
USF1-205ENST00000473969 A0A087WV62 115 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 TCP11X1B4DZS4 312 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 PLOD2O00469 737 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 ACOX3O15254 700 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 CNR1P21554 472 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 MC3RP41968 323 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 PPICP45877 212 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 MEOX1P50221 254 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 CLDN8P56748 225 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 PSPHP78330 225 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 ALDH6A1Q02252 535 aaKnown RBP12.7□□□□□ -0.38
USF1-205ENST00000473969 ZNF155Q12901 538 aaPredicted RBP12.7□□□□□ -0.38
USF1-205ENST00000473969 PDE7AQ13946 482 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 ZNHIT3Q15649 155 aaPredicted RBP12.7□□□□□ -0.38
USF1-205ENST00000473969 PRSS53Q2L4Q9 553 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 LSM12Q3MHD2 195 aaKnown RBP12.7□□□□□ -0.38
USF1-205ENST00000473969 ZNF551Q7Z340 670 aaPredicted RBP12.7□□□□□ -0.38
USF1-205ENST00000473969 SZRD1Q7Z422 152 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 MDGA2Q7Z553 956 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 SPATA19Q7Z5L4 167 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 SULF2Q8IWU5 870 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 ARFGAP2Q8N6H7 521 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 POGLUT1Q8NBL1 392 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 CEP70Q8NHQ1 597 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 CIDECQ96AQ7 238 aaPredicted RBP12.7□□□□□ -0.38
USF1-205ENST00000473969 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 HSPBAP1Q96EW2 488 aa12.7□□□□□ -0.38
USF1-205ENST00000473969 C7orf26Q96N11 449 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms