RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 AZI2Q9H6S1 392 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 RPF1Q9H9Y2 349 aaKnown RBP2.14□□□□□ -2.07
CALD1-216ENST00000473714 UPF2Q9HAU5 1272 aaKnown RBP2.14□□□□□ -2.07
CALD1-216ENST00000473714 ACKR4Q9NPB9 350 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 SPHK2Q9NRA0 654 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 INTS10Q9NVR2 710 aaKnown RBP2.14□□□□□ -2.07
CALD1-216ENST00000473714 FAM118AQ9NWS6 357 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 SPHK1Q9NYA1 384 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 SLCO1C1Q9NYB5 712 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 ELOVL5Q9NYP7 299 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 SMARCAL1Q9NZC9 954 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 ZNF224Q9NZL3 707 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 NDUFA13Q9P0J0 144 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 KLHL9Q9P2J3 617 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 MAD2L2Q9UI95 211 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 SLC7A7Q9UM01 511 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 FAF1Q9UNN5 650 aaPredicted RBP2.14□□□□□ -2.07
CALD1-216ENST00000473714 PIN4Q9Y237 131 aaKnown RBP2.14□□□□□ -2.07
CALD1-216ENST00000473714 MRPL11Q9Y3B7 192 aaKnown RBP2.14□□□□□ -2.07
CALD1-216ENST00000473714 OR2W1Q9Y3N9 320 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 UNC13CQ8NB66 2214 aa2.14□□□□□ -2.07
CALD1-216ENST00000473714 SEC16AO15027 2179 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 TRRAPQ9Y4A5 3859 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 IGLV5-37A0A075B6J1 123 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 TRAV24A0A0B4J272 114 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 LOC100653049A0A140TA62 436 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ILVBLA1L0T0 632 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MTMR11A4FU01 709 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CASTOR2A6NHX0 329 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 LILRA5A6NI73 299 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 PRR32B1ATL7 298 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 HNRNPCL2B2RXH8 293 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 TMEM150CB9EJG8 249 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 PLOD2O00469 737 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 RASGRF2O14827 1237 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MID1O15344 667 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MAGEB2O15479 319 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 KRT86O43790 486 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 DUX1O43812 170 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 VEGFDO43915 354 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SSX5O60225 188 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 PRAF2O60831 178 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 GRAP2O75791 330 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 KRT34O76011 436 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SOX30O94993 753 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 VENTXO95231 258 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 IGLV3-19P01714 112 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 APODP05090 189 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ALPPP05187 535 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CSN3P07498 182 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 GSTA2P09210 222 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 UBTFL1P0CB47 393 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 PRKAR1AP10644 381 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ALPPL2P10696 532 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 LIFP15018 202 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ZNF23P17027 643 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CDH3P22223 829 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 IL10P22301 178 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MT3P25713 68 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 GABRR2P28476 465 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 UGT1A5P35504 534 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 AHRP35869 848 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 NR4A2P43354 598 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MBTD1Q05BQ5 628 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CACNG1Q06432 222 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 IL10RBQ08334 325 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SLC20A2Q08357 652 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CDC20Q12834 499 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 DRP2Q13474 957 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 KRT81Q14533 505 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 KRT31Q15323 416 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SF3B4Q15427 424 aaKnown RBP eCLIP2.13□□□□□ -2.07
CALD1-216ENST00000473714 CEBPEQ15744 281 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 NPTX1Q15818 432 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 QRICH1Q2TAL8 776 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 LBHQ53QV2 105 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 DCAF10Q5QP82 559 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 TPGS2Q68CL5 300 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 TTC27Q6P3X3 843 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SLC27A1Q6PCB7 646 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MFSD7Q6UXD7 560 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ISLR2Q6UXK2 745 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 TRMT1LQ7Z2T5 733 aaKnown RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 ZNF554Q86TJ5 538 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 NUDT13Q86X67 352 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MEX3DQ86XN8 651 aaKnown RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 TMEM139Q8IV31 216 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SERPINA12Q8IW75 414 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CNTN4Q8IWV2 1026 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CMTM8Q8IZV2 173 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 EID3Q8N140 333 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 CRYBG2Q8N1P7 616 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MUC20Q8N307 709 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 SFRP1Q8N474 314 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 PRR26Q8N8Z3 221 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ACBD4Q8NC06 268 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 NPEPL1Q8NDH3 523 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 OR13J1Q8NGT2 312 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 EXOC6Q8TAG9 804 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SLC13A3Q8WWT9 602 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms