RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CXCL14O95715 111 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 AGR2O95994 175 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 WNT11O96014 354 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PLGP00747 810 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SERPINA1P01009 418 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 NCF1P14598 390 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 HDCP19113 662 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 G0S2P27469 103 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SSTR2P30874 369 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 LCN1P31025 176 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 GRK5P34947 590 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 RPS19P39019 145 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CEACAM6P40199 344 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CASP9P55211 416 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CD81P60033 236 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 KRT33BQ14525 404 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 GANABQ14697 944 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 GRM3Q14832 879 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PTPN20Q4JDL3 420 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM74A1Q5RGS3 127 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PRAMEF9Q5VWM5 478 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 UQCC3Q6UW78 93 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 HSDL2Q6YN16 418 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 TMPRSS11FQ6ZWK6 438 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 AHSA2Q719I0 299 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC41A1Q8IVJ1 513 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SPATA6LQ8N4H0 392 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ARRDC1Q8N5I2 433 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 C1orf52Q8N6N3 182 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 DNERQ8NFT8 737 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 OR4F6Q8NGB9 312 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 OR14A16Q8NHC5 309 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SPATA22Q8NHS9 363 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SPPL3Q8TCT6 385 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF675Q8TD23 568 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ST7LQ8TDW4 575 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CA5BP1Q8WTZ4 195 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 AUTS2Q8WXX7 1259 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 RFKQ969G6 155 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 TCEAL4Q96EI5 215 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SCMH1Q96GD3 660 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ZBED3Q96IU2 234 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MSLNLQ96KJ4 702 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF558Q96NG5 402 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 NT5C1BQ96P26 610 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PKP4Q99569 1192 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CDCA3Q99618 268 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MCOLN1Q9GZU1 580 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 OR51V1Q9H2C8 321 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SPACA1Q9HBV2 294 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PISDQ9UG56 409 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ZFC3H1O60293 1989 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 A0A0U1RQF3 1178 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 BTBD17A6NE02 478 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 HSBP1L1C9JCN9 74 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PRRT4C9JH25 899 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 TEX46H3BTG2 121 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 I6L893 689 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PGK1P00558 417 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MT-ND1P03886 318 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC2A2P11168 524 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 G6PDP11413 515 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MLNP12872 115 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ENGP17813 658 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 RHCEP18577 417 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ANXA7P20073 488 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 GPX3P22352 226 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SDC4P31431 198 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MMP12P39900 470 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CCR9P51686 369 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 NAGLUP54802 743 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 NUTF2P61970 127 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 TNFRSF17Q02223 184 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ROM1Q03395 351 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 EIF4HQ15056 248 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PTRHD1Q6GMV3 140 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 JADE1Q6IE81 842 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 IFNEQ86WN2 208 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 RDM1Q8NG50 284 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 OR10H5Q8NGA6 315 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 OR11H7Q8NGC8 314 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 OR10J5Q8NHC4 309 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 C2CD4CQ8TF44 421 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 RNF139Q8WU17 664 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CPA5Q8WXQ8 436 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ZBED6CLQ96FA7 236 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 TAAR9Q96RI9 348 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 HBEGFQ99075 208 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SARGQ9BW04 601 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PLA2G12BQ9BX93 195 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 AMNQ9BXJ7 453 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 GABARAPL1Q9H0R8 117 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 REEP4Q9H6H4 257 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 BCAS3Q9H6U6 928 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 LTB4R2Q9NPC1 389 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MTMR10Q9NXD2 777 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SLCO1C1Q9NYB5 712 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ARHGAP28Q9P2N2 729 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 FEM1BQ9UK73 627 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 A0A096LPK6 155 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms