RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TM9SF4Q92544 642 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 KAT2AQ92830 837 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 CIDECQ96AQ7 238 aaPredicted RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 SNRNP40Q96DI7 357 aaKnown RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 ZNF317Q96PQ6 595 aaPredicted RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 RASL10BQ96S79 203 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 BARD1Q99728 777 aaKnown RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 GLIPR2Q9H4G4 154 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 TRIM45Q9H8W5 580 aaPredicted RBP12.14□□□□□ -0.47
TPM3-216ENST00000473036 MEAF6Q9HAF1 191 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 SLCO1B3Q9NPD5 702 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 TAS2R7Q9NYW3 318 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 MAP10Q9P2G4 905 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 TMED5Q9Y3A6 229 aa12.14□□□□□ -0.47
TPM3-216ENST00000473036 KITP10721 976 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 G6PDP11413 515 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 COX7A2P14406 83 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 GSTM5P46439 218 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 DIO3P55073 304 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 PMP22Q01453 160 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 TLR1Q15399 786 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 INPP5JQ15735 1006 aaPredicted RBP12.13□□□□□ -0.47
TPM3-216ENST00000473036 SMU1Q2TAY7 513 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 ATP6AP1LQ52LC2 224 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 IKBIPQ70UQ0 350 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 LARP4Q71RC2 724 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM3-216ENST00000473036 MDGA2Q7Z553 956 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 RIMKLAQ8IXN7 391 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 OR7G2Q8NG99 324 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 ADIPOR1Q96A54 375 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 TUBGCP3Q96CW5 907 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 SCMH1Q96GD3 660 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 PPP3R2Q96LZ3 170 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 PELOQ9BRX2 385 aaKnown RBP12.13□□□□□ -0.47
TPM3-216ENST00000473036 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 WWTR1Q9GZV5 400 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM3-216ENST00000473036 OR10A5Q9H207 317 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 WDR55Q9H6Y2 383 aaPredicted RBP12.13□□□□□ -0.47
TPM3-216ENST00000473036 TEKT2Q9UIF3 430 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 WBP11Q9Y2W2 641 aaKnown RBP12.13□□□□□ -0.47
TPM3-216ENST00000473036 ZNF780BQ9Y6R6 833 aa12.13□□□□□ -0.47
TPM3-216ENST00000473036 DYTNA2CJ06 578 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 ANKRD28O15084 1053 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 TBX19O60806 448 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 SEMA7AO75326 666 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 FAM107AO95990 144 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 ALDOCP09972 364 aaKnown RBP12.12□□□□□ -0.47
TPM3-216ENST00000473036 EFNA1P20827 205 aaPredicted RBP12.12□□□□□ -0.47
TPM3-216ENST00000473036 SOX3P41225 446 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 FRKP42685 505 aaPredicted RBP12.12□□□□□ -0.47
TPM3-216ENST00000473036 EMDP50402 254 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 HLCSP50747 726 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 GYS2P54840 703 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 EMX2Q04743 252 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 MAD2L1Q13257 205 aaPredicted RBP12.12□□□□□ -0.47
TPM3-216ENST00000473036 SLC9B1Q4ZJI4 515 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 PIGGQ5H8A4 983 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 TMEM64Q6YI46 380 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 RNF111Q6ZNA4 994 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 FAM47EQ6ZV65 393 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 FAM9CQ8IZT9 166 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 SLC34A3Q8N130 599 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 VWA5B2Q8N398 1253 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 FNDC5Q8NAU1 212 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 C7orf57Q8NEG2 295 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 OR7A2PQ8NGA2 310 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 C16orf52Q8NHV5 167 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 NUBPLQ8TB37 319 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 ZNF675Q8TD23 568 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 AMDHD1Q96NU7 426 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 UTP23Q9BRU9 249 aaKnown RBP12.12□□□□□ -0.47
TPM3-216ENST00000473036 REEP4Q9H6H4 257 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 ASF1BQ9NVP2 202 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 KLHL14Q9P2G3 628 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 COPS7AQ9UBW8 275 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 PSME2Q9UL46 239 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 ERVK-11Q9UQG0 969 aa12.12□□□□□ -0.47
TPM3-216ENST00000473036 YARS2Q9Y2Z4 477 aaKnown RBP12.12□□□□□ -0.47
TPM3-216ENST00000473036 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ZGRF1Q86YA3 2104 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 A0A0G2JMM0 328 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 GOLGA8QA0A0J9YX86 632 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 A0A1W2PPB8 328 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 A0A1W2PRS3 328 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 GOLGA8OA6NCC3 632 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 KIR3DP1A8MWS1 328 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 GOLGA8NF8WBI6 632 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 PRAMEF2O60811 474 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 LAMP1P11279 417 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 GPX3P22352 226 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 EPHA3P29320 983 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 SSR4P51571 173 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ZNF766Q5HY98 468 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 GKAP1Q5VSY0 366 aaPredicted RBP12.11□□□□□ -0.47
TPM3-216ENST00000473036 METTL21CQ5VZV1 264 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 HIST2H2BCQ6DN03 193 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms