RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 NDE1Q9NXR1 346 aa15.7■□□□□ 0.1
CCM2-205ENST00000472223 C19orf53Q9UNZ5 99 aaPredicted RBP15.7■□□□□ 0.1
CCM2-205ENST00000472223 CORO2BQ9UQ03 480 aa15.7■□□□□ 0.1
CCM2-205ENST00000472223 TRBV11-1A0A0K0K1C0 115 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 ARGFXA6NJG6 315 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 TTC36A6NLP5 189 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 UPK1AO00322 258 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 DDAH2O95865 285 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 CAPNS1P04632 268 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 SERPINA7P05543 415 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 GSNP06396 782 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 CT62P0C5K7 136 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 SSTR4P31391 388 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 DCAF7P61962 342 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 TLE3Q04726 772 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 GABPB1Q06547 395 aaPredicted RBP15.69■□□□□ 0.1
CCM2-205ENST00000472223 EXOSC7Q15024 291 aaKnown RBP15.69■□□□□ 0.1
CCM2-205ENST00000472223 DEFB109BQ30KR1 87 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 PAGE3Q5JUK9 113 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 JMJD6Q6NYC1 403 aaPredicted RBP15.69■□□□□ 0.1
CCM2-205ENST00000472223 ZCCHC12Q6PEW1 402 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 DNAJC14Q6Y2X3 702 aaPredicted RBP15.69■□□□□ 0.1
CCM2-205ENST00000472223 DPP10Q8N608 796 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 NFAM1Q8NET5 270 aaPredicted RBP15.69■□□□□ 0.1
CCM2-205ENST00000472223 ZNF721Q8TF20 911 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 ROPN1LQ96C74 230 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 RCN3Q96D15 328 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 FAM120BQ96EK7 910 aaKnown RBP15.69■□□□□ 0.1
CCM2-205ENST00000472223 MS4A4EQ96PG1 132 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 NPAS2Q99743 824 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 CXorf36Q9H7Y0 433 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 IL1RL2Q9HB29 575 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 ZNF639Q9UID6 485 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 TEKT2Q9UIF3 430 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 PPIEQ9UNP9 301 aaKnown RBP15.69■□□□□ 0.1
CCM2-205ENST00000472223 PCDHGB3Q9Y5G1 929 aa15.69■□□□□ 0.1
CCM2-205ENST00000472223 URB1O60287 2271 aaKnown RBP15.68■□□□□ 0.1
CCM2-205ENST00000472223 NUP214P35658 2090 aaPredicted RBP15.68■□□□□ 0.1
CCM2-205ENST00000472223 C2orf92A0A1B0GVN3 265 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 CALB2P22676 271 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 ITGA3P26006 1051 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 NUDT2P50583 147 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 TXNL4AP83876 142 aaKnown RBP15.68■□□□□ 0.1
CCM2-205ENST00000472223 VAC14Q08AM6 782 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 MGAT2Q10469 447 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 ZNF155Q12901 538 aaPredicted RBP15.68■□□□□ 0.1
CCM2-205ENST00000472223 MYBPC3Q14896 1274 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 TRMT5Q32P41 509 aaKnown RBP15.68■□□□□ 0.1
CCM2-205ENST00000472223 ATP1A1-AS1Q5TC04 95 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 C6orf120Q7Z4R8 191 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 SLC5A8Q8N695 610 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 OR8K3Q8NH51 312 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 OR5AK3PQ8NH89 298 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 JADE3Q92613 823 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 THOC3Q96J01 351 aaKnown RBP15.68■□□□□ 0.1
CCM2-205ENST00000472223 SLC35G5Q96KT7 338 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 PHF12Q96QT6 1004 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 NUDT9Q9BW91 350 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 SEMA4CQ9C0C4 833 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 ING2Q9H160 280 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 SLC52A3Q9NQ40 469 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 EQTNQ9NQ60 294 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 SERHLQ9NQF3 203 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 PCDHB14Q9Y5E9 798 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 ACACAQ13085 2346 aa15.68■□□□□ 0.1
CCM2-205ENST00000472223 A0A087WV48 116 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 C15orf38-AP3S2A0A0A6YYH1 394 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 DUXAA6NLW8 204 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 A8MUI8 341 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 FBP2O00757 339 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 AGR2O95994 175 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 IGKV3-11P04433 115 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 WT1P19544 449 aaPredicted RBP15.67■□□□□ 0.1
CCM2-205ENST00000472223 CDKN2CP42773 168 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 RASSF2P50749 326 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 SLC37A1P57057 533 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 RNF4P78317 190 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 PSPHP78330 225 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 LRIF1Q5T3J3 769 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 ARPINQ7Z6K5 226 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 CDRT4Q8N9R6 151 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 KDF1Q8NAX2 398 aaPredicted RBP15.67■□□□□ 0.1
CCM2-205ENST00000472223 ELP5Q8TE02 316 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 ADAMTS15Q8TE58 950 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 LRRC58Q96CX6 371 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 GAL3ST4Q96RP7 486 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 HOPXQ9BPY8 73 aaPredicted RBP15.67■□□□□ 0.1
CCM2-205ENST00000472223 MESP1Q9BRJ9 268 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 THUMPD3Q9BV44 507 aaKnown RBP15.67■□□□□ 0.1
CCM2-205ENST00000472223 ACTRT3Q9BYD9 372 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 LHPPQ9H008 270 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 PAIP1Q9H074 479 aaKnown RBP15.67■□□□□ 0.1
CCM2-205ENST00000472223 SIRT3Q9NTG7 399 aaPredicted RBP15.67■□□□□ 0.1
CCM2-205ENST00000472223 RYDENQ9NUL5 291 aaKnown RBP15.67■□□□□ 0.1
CCM2-205ENST00000472223 ARL8BQ9NVJ2 186 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 NTMQ9P121 344 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 ABI3Q9P2A4 366 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 AP3M1Q9Y2T2 418 aa15.67■□□□□ 0.1
CCM2-205ENST00000472223 HEMK1Q9Y5R4 338 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms