RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ASMT	P46597	345 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	SGSH	P51688	502 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	SLC8A3	P57103	927 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	SNX1	Q13596	522 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	LRIT3	Q3SXY7	679 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	AGK	Q53H12	422 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	SEL1L3	Q68CR1	1132 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	SLC25A42	Q86VD7	318 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	FAM71C	Q8NEG0	241 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	ZNF397	Q8NF99	534 aa	Predicted RBP	3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	PHYHIP	Q92561	330 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	TOMM40L	Q969M1	308 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	SAMD8	Q96LT4	415 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	C1orf147	Q96MC9	270 aa	Predicted RBP	3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	FOXN4	Q96NZ1	517 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	DEFB118	Q96PH6	123 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	FAM111A	Q96PZ2	611 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	NLN	Q9BYT8	704 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	NMNAT2	Q9BZQ4	307 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	NACA2	Q9H009	215 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	IL1RL2	Q9HB29	575 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	ELL3	Q9HB65	397 aa	Predicted RBP	3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	NRN1	Q9NPD7	142 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	ZNF581	Q9P0T4	197 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044	ODF2L	Q9ULJ1	636 aa		3.02	□□□□□ -1.93
PTCD3-209	ENST00000472044		A0A1B0GTH9	108 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	BICDL2	A1A5D9	508 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	KRT87P	A6NCN2	255 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	SRRM5	B3KS81	715 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	PDLIM1	O00151	329 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	MCF2L	O15068	1137 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	SH3BGRL	O75368	114 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	TOX	O94900	526 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	TBX6	O95947	436 aa	Predicted RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	PROS1	P07225	676 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	GSTA1	P08263	222 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	RALA	P11233	206 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	CAPN2	P17655	700 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	GATA2	P23769	480 aa	Predicted RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	UCP1	P25874	307 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	PTPN4	P29074	926 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	SAA4	P35542	130 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	RABIF	P47224	123 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	GSTO1	P78417	241 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	MYBPC1	Q00872	1141 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	CYLC2	Q14093	348 aa	Predicted RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	PDIA5	Q14554	519 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	CD226	Q15762	336 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	TMEM44	Q2T9K0	475 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	ZNF699	Q32M78	642 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	TCTEX1D4	Q5JR98	221 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	FBXL22	Q6P050	247 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	ABRAXAS1	Q6UWZ7	409 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	RBM43	Q6ZSC3	357 aa	Known RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	STOX1	Q6ZVD7	989 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	GOLGA7	Q7Z5G4	137 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	ERC1	Q8IUD2	1116 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	PYROXD2	Q8N2H3	581 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	MINDY2	Q8NBR6	621 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	OR4Q3	Q8NH05	313 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	OR2L2	Q8NH16	312 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	NCLN	Q969V3	563 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	BIRC7	Q96CA5	298 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	WBP1	Q96G27	269 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	KCNK16	Q96T55	309 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	WRAP53	Q9BUR4	548 aa	Known RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	AMBN	Q9NP70	447 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	ABCC13	Q9NSE7	274 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	MBD2	Q9UBB5	411 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	BCAP29	Q9UHQ4	241 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	PURG	Q9UJV8	347 aa	Known RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	IKZF3	Q9UKT9	509 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	ZNF490	Q9ULM2	529 aa	Predicted RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	NUDC	Q9Y266	331 aa		3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	MTF2	Q9Y483	593 aa	Predicted RBP	3.01	□□□□□ -1.93
PTCD3-209	ENST00000472044	IGHV3OR16-12	A0A075B7B8	117 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044		E9PMD0	336 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	SGK494	L7N484	410 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	RASGRF2	O14827	1237 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	CFLAR	O15519	480 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	ADAM12	O43184	909 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	GOT2	P00505	430 aa	Known RBP	3	□□□□□ -1.93
PTCD3-209	ENST00000472044	TGFA	P01135	160 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	HSD17B1	P14061	328 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	BCL3	P20749	454 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	PRDX6	P30041	224 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	VCP	P55072	806 aa	Known RBP	3	□□□□□ -1.93
PTCD3-209	ENST00000472044	KRTAP10-6	P60371	365 aa	Predicted RBP	3	□□□□□ -1.93
PTCD3-209	ENST00000472044	NAAA	Q02083	359 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	GABPB1	Q06547	395 aa	Predicted RBP	3	□□□□□ -1.93
PTCD3-209	ENST00000472044	ZFP36L1	Q07352	338 aa	Known RBP	3	□□□□□ -1.93
PTCD3-209	ENST00000472044	FUT7	Q11130	342 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	COX10	Q12887	443 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	BTG3	Q14201	252 aa	Predicted RBP	3	□□□□□ -1.93
PTCD3-209	ENST00000472044	NHLRC3	Q5JS37	347 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	TCHHL1	Q5QJ38	904 aa	Predicted RBP	3	□□□□□ -1.93
PTCD3-209	ENST00000472044	LIPK	Q5VXJ0	399 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	LEMD1	Q68G75	181 aa		3	□□□□□ -1.93
PTCD3-209	ENST00000472044	REG3G	Q6UW15	175 aa		3	□□□□□ -1.93

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