RNA–Protein interactions for RNA: ENST00000471681.5

CCDC66-213, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 3,120 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-213ENST00000471681 ETFDHQ16134 617 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 ATP13A5Q4VNC0 1218 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 C14orf28Q4W4Y0 310 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 LIPMQ5VYY2 423 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 ANKS6Q68DC2 871 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 C1orf94Q6P1W5 598 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 TMEM64Q6YI46 380 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 FAM122BQ7Z309 247 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 SERPINA9Q86WD7 417 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 PIANPQ8IYJ0 282 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 PHACTR4Q8IZ21 702 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 CENPSQ8N2Z9 138 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 ASCC1Q8N9N2 400 aaKnown RBP3.3□□□□□ -1.88
CCDC66-213ENST00000471681 SPATA22Q8NHS9 363 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 SLC13A3Q8WWT9 602 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 ELP4Q96EB1 424 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 ZNF486Q96H40 463 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-213ENST00000471681 TMEM80Q96HE8 168 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 CAPZA3Q96KX2 299 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 C9orf72Q96LT7 481 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 PAFAH2Q99487 392 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 SORT1Q99523 831 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 COPS8Q99627 209 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 OLFM1Q99784 485 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 TREX2Q9BQ50 279 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-213ENST00000471681 CD244Q9BZW8 370 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 RACGAP1Q9H0H5 632 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 LRMDAQ9H2I8 198 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 SEMA6CQ9H3T2 930 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 RANBP3Q9H6Z4 567 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-213ENST00000471681 COQ10BQ9H8M1 238 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 MOV10Q9HCE1 1003 aaKnown RBP3.3□□□□□ -1.88
CCDC66-213ENST00000471681 OLAHQ9NV23 265 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 SMARCAL1Q9NZC9 954 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 ANAPC2Q9UJX6 822 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 PRELID3BQ9Y3B1 194 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 CLDN16Q9Y5I7 305 aa3.3□□□□□ -1.88
CCDC66-213ENST00000471681 SMIM31A0A1B0GVY4 71 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 TCRBV21S2A2A0A5A6 115 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 FAM172BPA6NC97 362 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 MARCH11A6NNE9 402 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 A8MUI8 341 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CXorf49A8MYA2 514 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 AURKAO14965 403 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SLC22A1O15245 554 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 GMDSO60547 372 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CCNT2O60583 730 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 EIF1BO60739 113 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CTSBP07858 339 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 JUPP14923 745 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CD247P20963 164 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 PEBP1P30086 187 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 EIF1P41567 113 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 RPL35P42766 123 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CDKN1BP46527 198 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CAPZBP47756 277 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 OR3A3P47888 321 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 MECP2P51608 486 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 MAPK10P53779 464 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 ERVPABLB-1P60509 514 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 PPP2CBP62714 309 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 ERVK-8P63133 956 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 PPP2CAP67775 309 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 IRX4P78413 519 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SPEM2Q0P670 501 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 VEZF1Q14119 521 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 FLOT2Q14254 428 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SEC23BQ15437 767 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 RPE65Q16518 533 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CDO1Q16878 200 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 KHDC1Q4VXA5 237 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 YIF1BQ5BJH7 314 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 ACER2Q5QJU3 275 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SLC35F1Q5T1Q4 408 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 LRIF1Q5T3J3 769 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 STEAP3Q658P3 488 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 OR5M10Q6IEU7 315 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SLCO4C1Q6ZQN7 724 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 Q7L0L9 218 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SPATA19Q7Z5L4 167 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SPRED1Q7Z699 444 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CIR1Q86X95 450 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 TMEM126BQ8IUX1 230 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SFTPA1Q8IWL2 248 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 TUSC5Q8IXB3 177 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 SELENOHQ8IZQ5 122 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 DSELQ8IZU8 1212 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CAMKVQ8NCB2 501 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 FAM13CQ8NE31 585 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 PLPP5Q8NEB5 264 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 TSTD1Q8NFU3 115 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 STAG3L4Q8TBR4 150 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 UBE2E3Q969T4 207 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CTHRC1Q96CG8 243 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 TRNT1Q96Q11 434 aaKnown RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 CCNL2Q96S94 520 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 ACOX2Q99424 681 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 ELF4Q99607 663 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-213ENST00000471681 TRIM51Q9BSJ1 452 aa3.29□□□□□ -1.88
CCDC66-213ENST00000471681 LRRC61Q9BV99 259 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms