RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 KRTCAP2Q8N6L1 136 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 HORMAD2Q8N7B1 307 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 OR7A2PQ8NGA2 310 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 SLC22A8Q8TCC7 542 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 CPT1CQ8TCG5 803 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 ADIPOR1Q96A54 375 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 ERP27Q96DN0 273 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 C5orf34Q96MH7 638 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 ITPAQ9BY32 194 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 WDR55Q9H6Y2 383 aaPredicted RBP18.27■□□□□ 0.52
HDAC7-220ENST00000471235 KLHL1Q9NR64 748 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 SH3BP4Q9P0V3 963 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 PCDHGB6Q9Y5F9 930 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 SVILO95425 2214 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 NCKAP5O14513 1909 aa18.27■□□□□ 0.51
HDAC7-220ENST00000471235 A8MVJ9 347 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 PLOD3O60568 738 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 SLITRK5O94991 958 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 ALDOCP09972 364 aaKnown RBP18.26■□□□□ 0.51
HDAC7-220ENST00000471235 CD46P15529 392 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 MC3RP41968 323 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 EMDP50402 254 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 C21orf58P58505 322 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 HSPB3Q12988 150 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 SLC9B1Q4ZJI4 515 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 TMEM107Q6UX40 140 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 LYPD8Q6UX82 237 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 ZNF551Q7Z340 670 aaPredicted RBP18.26■□□□□ 0.51
HDAC7-220ENST00000471235 RIMKLAQ8IXN7 391 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 ZFP28Q8NHY6 868 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 NUDT8Q8WV74 236 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 SNRNP40Q96DI7 357 aaKnown RBP18.26■□□□□ 0.51
HDAC7-220ENST00000471235 MAELQ96JY0 434 aaKnown RBP18.26■□□□□ 0.51
HDAC7-220ENST00000471235 MAGEB18Q96M61 343 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 HPF1Q9NWY4 346 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 USH1CQ9Y6N9 552 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 NINQ8N4C6 2090 aa18.26■□□□□ 0.51
HDAC7-220ENST00000471235 ZGRF1Q86YA3 2104 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 ATP8B1O43520 1251 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 NME2P1O60361 137 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 SP1P08047 785 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 DDX5P17844 614 aaKnown RBP18.25■□□□□ 0.51
HDAC7-220ENST00000471235 EFNA1P20827 205 aaPredicted RBP18.25■□□□□ 0.51
HDAC7-220ENST00000471235 PRPS1L1P21108 318 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 NME2P22392 152 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 NR0B1P51843 470 aaKnown RBP18.25■□□□□ 0.51
HDAC7-220ENST00000471235 CLDN8P56748 225 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 NNATQ16517 81 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 HSP90B2PQ58FF3 399 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 HLA-DQA1Q5Y7H0 255 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 OPN5Q6U736 354 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 IL20RBQ6UXL0 311 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 RGS9BPQ6ZS82 235 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 FAM47EQ6ZV65 393 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 SLC15A4Q8N697 577 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 TMEM178AQ8NBL3 297 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 C17orf47Q8NEP4 570 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 TP53INP1Q96A56 240 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 MIB2Q96AX9 1013 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 ZBED6CLQ96FA7 236 aaPredicted RBP18.25■□□□□ 0.51
HDAC7-220ENST00000471235 NXF5Q9H1B4 397 aaKnown RBP18.25■□□□□ 0.51
HDAC7-220ENST00000471235 MED4Q9NPJ6 270 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 AIG1Q9NVV5 245 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 MAP10Q9P2G4 905 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 PRODH2Q9UF12 536 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 ERVK-11Q9UQG0 969 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 CFL2Q9Y281 166 aa18.25■□□□□ 0.51
HDAC7-220ENST00000471235 A0A087WV62 115 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 PYCARD-AS1I3L0S3 204 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 PLOD2O00469 737 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 NME6O75414 186 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-220ENST00000471235 BCAS2O75934 225 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-220ENST00000471235 IFI6P09912 130 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 LAMP1P11279 417 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 CDK9P50750 372 aaKnown RBP18.24■□□□□ 0.51
HDAC7-220ENST00000471235 PMP22Q01453 160 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 SLC25A25Q6KCM7 469 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 GALNTL5Q7Z4T8 443 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 MDGA2Q7Z553 956 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 SPATA19Q7Z5L4 167 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 TMEM125Q96AQ2 219 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 TAAR6Q96RI8 345 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 ACSS1Q9NUB1 689 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-220ENST00000471235 ASF1BQ9NVP2 202 aa18.24■□□□□ 0.51
HDAC7-220ENST00000471235 COPG1Q9Y678 874 aaKnown RBP18.24■□□□□ 0.51
HDAC7-220ENST00000471235 NBASA2RRP1 2371 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 ANKRD28O15084 1053 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 COQ9O75208 318 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 PSMG1O95456 288 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 FBXO45P0C2W1 286 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 FOXK1P85037 733 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 ZNF791Q3KP31 576 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-220ENST00000471235 CPTPQ5TA50 214 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 NXNQ6DKJ4 435 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 FAM180AQ6UWF9 173 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 RTL4Q6ZR62 310 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 CAMKMTQ7Z624 323 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 TAGAPQ8N103 731 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 OR2L13Q8N349 312 aa18.23■□□□□ 0.51
HDAC7-220ENST00000471235 PSD4Q8NDX1 1056 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms