RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 PRKAA2P54646 552 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 TRA2BP62995 288 aaKnown RBP11.49□□□□□ -0.57
CCNL1-213ENST00000471044 FOXO1Q12778 655 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 CSTF3Q12996 717 aaKnown RBP11.49□□□□□ -0.57
CCNL1-213ENST00000471044 FAM219BQ5XKK7 198 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 SLC48A1Q6P1K1 146 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 GALNT12Q8IXK2 581 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 GSPT2Q8IYD1 628 aaKnown RBP11.49□□□□□ -0.57
CCNL1-213ENST00000471044 FAM109AQ8N4B1 249 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 TMEM251Q8N6I4 163 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 CDYL2Q8N8U2 506 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 ZNF441Q8N8Z8 693 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 LRRN4CLQ8ND94 238 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 TP53INP1Q96A56 240 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 TM4SF18Q96CE8 201 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 L3HYPDHQ96EM0 354 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 GAL3ST4Q96RP7 486 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 ZNF382Q96SR6 550 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 TUBA8Q9NY65 449 aaPredicted RBP11.49□□□□□ -0.57
CCNL1-213ENST00000471044 VPS29Q9UBQ0 182 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 TBK1Q9UHD2 729 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 DCDC2Q9UHG0 476 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 PKDREJQ9NTG1 2253 aa11.49□□□□□ -0.57
CCNL1-213ENST00000471044 DCHS2Q6V1P9 2916 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 CSMD2Q7Z408 3487 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 A0A1B0GVC2 190 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 C2orf92A0A1B0GVN3 265 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 A0A1W2PPM1 405 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 GLRA3O75311 464 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 PDE9AO76083 593 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 KRT6AP02538 564 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 KRT6BP04259 564 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 PORP16435 677 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-213ENST00000471044 SERPINB3P29508 390 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 HMOX2P30519 316 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 PIGAP37287 484 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 MAGEA5P43359 124 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 KRT6CP48668 564 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 NR0B1P51843 470 aaKnown RBP11.48□□□□□ -0.57
CCNL1-213ENST00000471044 PKNOX1P55347 436 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 CDSNQ15517 529 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 NTRK2Q16620 822 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 EMC4Q5J8M3 183 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 TCHHL1Q5QJ38 904 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-213ENST00000471044 C6orf163Q5TEZ5 329 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 TMEM211Q6ICI0 200 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 C3P1Q6ZMU1 363 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 SH2D5Q6ZV89 423 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 GPRIN3Q6ZVF9 776 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 TAGAPQ8N103 731 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 FBXW8Q8N3Y1 598 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 C1orf52Q8N6N3 182 aaKnown RBP11.48□□□□□ -0.57
CCNL1-213ENST00000471044 ZNF615Q8N8J6 731 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 OR7G1Q8NGA0 311 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 CHTF18Q8WVB6 975 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 HBEGFQ99075 208 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 OR10A5Q9H207 317 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 TP63Q9H3D4 680 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-213ENST00000471044 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 CNIH4Q9P003 139 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 MCM8Q9UJA3 840 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 CHCHD2Q9Y6H1 151 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-213ENST00000471044 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.48□□□□□ -0.57
CCNL1-213ENST00000471044 NAV3Q8IVL0 2385 aa11.48□□□□□ -0.57
CCNL1-213ENST00000471044 OR14I1A6ND48 311 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 GOLGA6L10A6NI86 522 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 SUSD5O60279 629 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 ULK1O75385 1050 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 ATP1B1P05026 303 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 ENO1P06733 434 aaKnown RBP11.47□□□□□ -0.57
CCNL1-213ENST00000471044 S1PR1P21453 382 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 NT5EP21589 574 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 DEKP35659 375 aaKnown RBP11.47□□□□□ -0.57
CCNL1-213ENST00000471044 NAA20P61599 178 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 MAP4K2Q12851 820 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 PRICKLE4Q2TBC4 344 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 PRAMEF20Q5VT98 475 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 HLA-DQA1Q5Y7H0 255 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 TRILQ7L0X0 811 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 TDRPQ86YL5 185 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 GBP7Q8N8V2 638 aaPredicted RBP11.47□□□□□ -0.57
CCNL1-213ENST00000471044 FAM13CQ8NE31 585 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 C17orf47Q8NEP4 570 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 METTL6Q8TCB7 284 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 UBLCP1Q8WVY7 318 aaPredicted RBP11.47□□□□□ -0.57
CCNL1-213ENST00000471044 ADIPOR1Q96A54 375 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 CCDC126Q96EE4 140 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 FAIM2Q9BWQ8 316 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 GSTO2Q9H4Y5 243 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 L2HGDHQ9H9P8 463 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 PPCSQ9HAB8 311 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 ZNF639Q9UID6 485 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 CNOT11Q9UKZ1 510 aaKnown RBP11.47□□□□□ -0.57
CCNL1-213ENST00000471044 PSME2Q9UL46 239 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 EMCNQ9ULC0 261 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 NPFFR2Q9Y5X5 522 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 LIPGQ9Y5X9 500 aa11.47□□□□□ -0.57
CCNL1-213ENST00000471044 AKAP9Q99996 3911 aa11.46□□□□□ -0.57
CCNL1-213ENST00000471044 ANKRD33BA6NCL7 494 aa11.46□□□□□ -0.57
CCNL1-213ENST00000471044 CAPN14A8MX76 684 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms