RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ZNF410Q86VK4 478 aa3.93□□□□□ -1.78
SSB-209ENST00000470621 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
SSB-209ENST00000470621 IKZF5Q9H5V7 419 aa3.93□□□□□ -1.78
SSB-209ENST00000470621 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
SSB-209ENST00000470621 CELA1Q9UNI1 258 aa3.93□□□□□ -1.78
SSB-209ENST00000470621 MRPS2Q9Y399 296 aaKnown RBP3.93□□□□□ -1.78
SSB-209ENST00000470621 PRRC2AP48634 2157 aaKnown RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 IGHV3-35A0A0C4DH35 117 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 EFCAB7A8K855 629 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 RANBP6O60518 1105 aaKnown RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 KINO60870 393 aaKnown RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 LRP3O75074 770 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 LY6G6DO95868 133 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 SERPINF2P08697 491 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 IDSP22304 550 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 SAA4P35542 130 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 NSFP46459 744 aaKnown RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 SLC25A1P53007 311 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 VCPP55072 806 aaKnown RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 CDKL1Q00532 357 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 ZNF85Q03923 595 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 ZKSCAN8Q15776 578 aaPredicted RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 BNIPLQ7Z465 357 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 CNTN4Q8IWV2 1026 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 KRT35Q92764 455 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 DTD2Q96FN9 168 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 CCT8L2Q96SF2 557 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 CPXM1Q96SM3 734 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 FAM173AQ9BQD7 235 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 ABCG4Q9H172 646 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 ALDH8A1Q9H2A2 487 aaPredicted RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 ESM1Q9NQ30 184 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 CENPMQ9NSP4 180 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 NDUFA13Q9P0J0 144 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 RAI14Q9P0K7 980 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 CIDEBQ9UHD4 219 aa3.92□□□□□ -1.78
SSB-209ENST00000470621 ZNF256Q9Y2P7 627 aaPredicted RBP3.92□□□□□ -1.78
SSB-209ENST00000470621 FRG2CA6NGY1 282 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 HAT1O14929 419 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 PRAMEF12O95522 483 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 NUDT14O95848 222 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 PVRP15151 417 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 PGAM2P15259 253 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 AREGP15514 252 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 ACP1P24666 158 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 IL2RGP31785 369 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 FNTAP49354 379 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 CNN1P51911 297 aaKnown RBP3.91□□□□□ -1.78
SSB-209ENST00000470621 CD226Q15762 336 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 CLPPQ16740 277 aaPredicted RBP3.91□□□□□ -1.78
SSB-209ENST00000470621 MICAQ29983 383 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 ZNF525Q8N782 197 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 SPATA13Q96N96 652 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 ZIM3Q96PE6 472 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 C19orf43Q9BQ61 176 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 PAXXQ9BUH6 204 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 NLNQ9BYT8 704 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 IMPAD1Q9NX62 359 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 VPS54Q9P1Q0 977 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 ERVK-18Q9QC07 812 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 CLEC4EQ9ULY5 219 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 KLF2Q9Y5W3 355 aaPredicted RBP3.91□□□□□ -1.78
SSB-209ENST00000470621 TEX264Q9Y6I9 313 aa3.91□□□□□ -1.78
SSB-209ENST00000470621 TDRD6O60522 2096 aaKnown RBP3.91□□□□□ -1.78
SSB-209ENST00000470621 FAM170AA1A519 330 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 PDE5AO76074 875 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 SNRPCP09234 159 aaKnown RBP3.9□□□□□ -1.79
SSB-209ENST00000470621 POU3F4P49335 361 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 MEOX2P50222 304 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 ARHGDIBP52566 201 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 LYZP61626 148 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 NPRL3Q12980 569 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 MFSD7Q6UXD7 560 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 UNC5CLQ8IV45 518 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 OR4F17Q8NGA8 305 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 SNX21Q969T3 373 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 SLCO4A1Q96BD0 722 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 VSIG2Q96IQ7 327 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 ZNF414Q96IQ9 312 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 OR4F4Q96R69 305 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 TEX13BQ9BXU2 312 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 TRIM9Q9C026 710 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 CARD9Q9H257 536 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 TMEM245Q9H330 911 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 COPS7AQ9UBW8 275 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 ENTPD4Q9Y227 616 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 SLC9A8Q9Y2E8 581 aa3.9□□□□□ -1.79
SSB-209ENST00000470621 RPH3AQ9Y2J0 694 aaPredicted RBP3.9□□□□□ -1.79
SSB-209ENST00000470621 GJB5O95377 273 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 ALPIP09923 528 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 NPY2RP49146 381 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 CCL11P51671 97 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 RAG2P55895 527 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 ZNF79Q15937 498 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 CMPK2Q5EBM0 449 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 ATRAIDQ6UW56 229 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 STOX1Q6ZVD7 989 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 TOM1L2Q6ZVM7 507 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
SSB-209ENST00000470621 PYROXD2Q8N2H3 581 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms