RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ZNF630Q2M218 657 aaPredicted RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CYBRD1Q53TN4 286 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ZNF385CQ66K41 422 aaPredicted RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 MFSD12Q6NUT3 480 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 TLDC1Q6P9B6 456 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CBLL1Q75N03 491 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CCDC80Q76M96 950 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SLC44A2Q8IWA5 706 aaPredicted RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ZNF595Q8IYB9 648 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 GPR135Q8IZ08 494 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 GPR32P1Q8NGA4 272 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 APOBEC4Q8WW27 367 aaKnown RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 XAGE5Q8WWM1 108 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 TSLPQ969D9 159 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 PYURFQ96I23 114 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SLC35G5Q96KT7 338 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 C7orf34Q96L11 122 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 OR7D2Q96RA2 312 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CTRCQ99895 268 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 TREX2Q9BQ50 279 aaPredicted RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 LRFN3Q9BTN0 628 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ALOXE3Q9BYJ1 711 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CXorf21Q9HAI6 301 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SEMA3GQ9NS98 782 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SEMA4GQ9NTN9 838 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 GIMAP4Q9NUV9 329 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 TOR4AQ9NXH8 423 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 VNN3Q9NY84 501 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CTSFQ9UBX1 484 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 FTSJ1Q9UET6 329 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ZNF639Q9UID6 485 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ABCG2Q9UNQ0 655 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 C19orf53Q9UNZ5 99 aaPredicted RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 DTX4Q9Y2E6 619 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 LRRC42Q9Y546 428 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 A0A1W2PNU3 283 aaPredicted RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 PDLIM1O00151 329 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 DLL1O00548 723 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 DLGAP1O14490 977 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 FCMRO60667 390 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CNOT3O75175 753 aaKnown RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SEMA7AO75326 666 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 STAMBPO95630 424 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 EPPINO95925 133 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CLPSP04118 112 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 GP1BAP07359 652 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 RAP2AP10114 183 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ACP2P11117 423 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ZNF28P17035 718 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 NT5EP21589 574 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SSTR4P31391 388 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 MAGEA2P43356 314 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 AQP4P55087 323 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 RBBP4Q09028 425 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 PUM1Q14671 1186 aaKnown RBP eCLIP7.78□□□□□ -1.167e-7■■■□□ 15.3
GTF3A-206ENST00000470606 ATP6AP1Q15904 470 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 DUSP5Q16690 384 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CRB2Q5IJ48 1285 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ANKRD34AQ69YU3 496 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 RHBDD2Q6NTF9 364 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 REEP3Q6NUK4 255 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 TBPL2Q6SJ96 375 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 MED25Q71SY5 747 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 EIF3MQ7L2H7 374 aaKnown RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 TMEM179BQ7Z7N9 219 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 NAXDQ8IW45 347 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 LGI4Q8N135 537 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SMYD1Q8NB12 490 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 OR56A1Q8NGH5 318 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 ZNF675Q8TD23 568 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 MVB12AQ96EY5 273 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SLC47A1Q96FL8 570 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 CIB1Q99828 191 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 DPYSL5Q9BPU6 564 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 NDC1Q9BTX1 674 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 EDEM2Q9BV94 578 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 QRSL1Q9H0R6 528 aaKnown RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 PRTFDC1Q9NRG1 225 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 DDX18Q9NVP1 670 aaKnown RBP7.78□□□□□ -1.16
GTF3A-206ENST00000470606 FBXO34Q9NWN3 711 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 TRPC4Q9UBN4 977 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SPACA6W5XKT8 324 aa7.78□□□□□ -1.16
GTF3A-206ENST00000470606 SDK2Q58EX2 2172 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 CFAP47Q6ZTR5 3102 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 CENPVL1A0A0U1RR11 272 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 C7orf72A4D263 438 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 C4orf47A7E2U8 309 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 LOC400499M0QZD8 3231 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 SOCS2O14508 198 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 HNRNPRO43390 633 aaKnown RBP7.77□□□□□ -1.17
GTF3A-206ENST00000470606 PRKNO60260 465 aaPredicted RBP7.77□□□□□ -1.17
GTF3A-206ENST00000470606 DIRAS1O95057 198 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 MFN2O95140 757 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 CD247P20963 164 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 IL10P22301 178 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 OR1E2P47887 323 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 EMDP50402 254 aa7.77□□□□□ -1.17
GTF3A-206ENST00000470606 DUSP3P51452 185 aaPredicted RBP7.77□□□□□ -1.17
GTF3A-206ENST00000470606 NUBP1P53384 320 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms