RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 THNSL2Q86YJ6 484 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 PRR22Q8IZ63 422 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 TMEM132CQ8N3T6 1108 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 ANKS4BQ8N8V4 417 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF610Q8N9Z0 462 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 MORN4Q8NDC4 146 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 FAM83FQ8NEG4 500 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 OR56A3Q8NH54 315 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 RAB3IL1Q8TBN0 382 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 RDH11Q8TC12 318 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 ZPLD1Q8TCW7 415 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 UCN3Q969E3 161 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 ABTB1Q969K4 478 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 NTNG2Q96CW9 530 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 MS4A6EQ96DS6 147 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 SENP5Q96HI0 755 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 PPP1R2P1Q96PQ5 205 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 FAM111AQ96PZ2 611 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 MAPKAP1Q9BPZ7 522 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 DOHHQ9BU89 302 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 MED18Q9BUE0 208 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 SFXN3Q9BWM7 321 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 ANGPTL4Q9BY76 406 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 HEATR1Q9H583 2144 aaKnown RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 LRTM1Q9HBL6 345 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 QPCTLQ9NXS2 382 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 SLAMF8Q9P0V8 285 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CLCF1Q9UBD9 225 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 BOKQ9UMX3 212 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-209ENST00000469511 MAPRE3Q9UPY8 281 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 LAMP3Q9UQV4 416 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 DHRS7Q9Y394 339 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 CLCA3PQ9Y6N3 262 aa4.77□□□□□ -1.65
PTPN4-209ENST00000469511 A0A1W2PS29 197 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 LRRC14BA6NHZ5 514 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 H0YC42 278 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 RTCAO00442 366 aaKnown RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 ERI3O43414 337 aaKnown RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 FGF17O60258 216 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PRAMEF4O60810 478 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 SH3BGRLO75368 114 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 HAUS5O94927 633 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 TJP3O95049 919 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 GUCA1CO95843 209 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CGAP01215 116 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 IGKV3-11P04433 115 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 APRTP07741 180 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CYP4B1P13584 511 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 TCEA1P23193 301 aaKnown RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PTPN6P29350 595 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 AHRP35869 848 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 UGT2B10P36537 528 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CD79BP40259 229 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CASP3P42574 277 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 TPD52P55327 224 aaPredicted RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 SIRPAP78324 504 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 OCRLQ01968 901 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 GUCY1A3Q02108 690 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 LAPTM5Q13571 262 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 SNX1Q13596 522 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 OASLQ15646 514 aaKnown RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 NHSL2Q5HYW2 709 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 UBAP2Q5T6F2 1119 aaKnown RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PRAMEF9Q5VWM5 478 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PAQR3Q6TCH7 311 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF793Q6ZN11 406 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 SH2D5Q6ZV89 423 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CILP2Q8IUL8 1156 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 KLHDC8AQ8IYD2 350 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PM20D2Q8IYS1 436 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 Q8N1Y9 231 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 OR5L2Q8NGL0 311 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 OR8K3Q8NH51 312 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 C1orf54Q8WWF1 131 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 SLC5A11Q8WWX8 675 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 AKAP1Q92667 903 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 HTRA1Q92743 480 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 DAZLQ92904 295 aaKnown RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PEX13Q92968 403 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CTHRC1Q96CG8 243 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 LRRC45Q96CN5 670 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PGM2Q96G03 612 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 LCORQ96JN0 433 aaPredicted RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 ART5Q96L15 291 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CCDC42Q96M95 316 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 RILPQ96NA2 401 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 GAL3ST4Q96RP7 486 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 NDNQ99608 321 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 KIFC1Q9BW19 673 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 BEX2Q9BXY8 128 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PCBD2Q9H0N5 130 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 L2HGDHQ9H9P8 463 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PRDM7Q9NQW5 492 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 ABHD10Q9NUJ1 306 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 TEX10Q9NXF1 929 aaPredicted RBP4.76□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF226Q9NYT6 803 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 CDC42EP3Q9UKI2 254 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 PACSIN3Q9UKS6 424 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 DAPP1Q9UN19 280 aa4.76□□□□□ -1.65
PTPN4-209ENST00000469511 C15orf41Q9Y2V0 281 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms