RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 MED10Q9BTT4 135 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 POLDIP3Q9BY77 421 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 FAM126AQ9BYI3 521 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ACPTQ9BZG2 426 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ZNF768Q9H5H4 540 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 CRTAC1Q9NQ79 661 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 NPDC1Q9NQX5 325 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 TLR8Q9NR97 1041 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 POLE3Q9NRF9 147 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 FZD4Q9ULV1 537 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 CLCA2Q9UQC9 943 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 CA5BQ9Y2D0 317 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 YARS2Q9Y2Z4 477 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ENPP4Q9Y6X5 453 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 SERTM1A2A2V5 107 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 AGAP14A8MT82 685 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 C2orf74A8MZ97 194 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 IGLV3-25P01717 112 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ZNF806P0C7X5 589 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 TFPIP10646 304 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 PRF1P14222 555 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 RGS4P49798 205 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 TAF6P49848 677 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ZNF124Q15973 351 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 FAM69AQ5T7M9 428 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 KIAA1211LQ6NV74 962 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 NCEH1Q6PIU2 408 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ZC3H14Q6PJT7 736 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 SBSNQ6UWP8 590 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 GSG1LQ6UXU4 331 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 TMUB2Q71RG4 321 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 METTL23Q86XA0 190 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 SPAG16Q8N0X2 631 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ARMC10Q8N2F6 343 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 LPPQ93052 612 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 RAD51AP1Q96B01 352 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 TOX2Q96NM4 488 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 TSSK3Q96PN8 268 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 MTG2Q9H4K7 406 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 SPATA6Q9NWH7 488 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 FLRT1Q9NZU1 646 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 ZNF214Q9UL59 606 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 CHST2Q9Y4C5 530 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 OARD1Q9Y530 152 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 PCDHB7Q9Y5E2 793 aa8.56□□□□□ -1.04
SMARCE1-207ENST00000469334 OR2M5A3KFT3 312 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 GABRR3A8MPY1 467 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 PRR23D1E9PI22 279 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 CLDN5O00501 218 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 GABRPO00591 440 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 EFCAB14O75071 495 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 NIPSNAP2O75323 286 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 NDUFS6O75380 124 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 OR2A4O95047 310 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SERPINA3P01011 423 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 GASTP01350 101 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SRPRAP08240 638 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SYPP08247 313 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 FBP1P09467 338 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 PRR23D2P0DMB1 279 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 TXNP10599 105 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 POU2F1P14859 743 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 POU3F2P20265 443 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ATP5A1P25705 553 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 MMP15P51511 669 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SMSP52788 366 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 PTPN5P54829 565 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SEC61A1P61619 476 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 LGALS3BPQ08380 585 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ZNF155Q12901 538 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SNTB1Q13884 538 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 BOP1Q14137 746 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 RGNQ15493 299 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 GGTA1PQ4G0N0 100 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SYTL3Q4VX76 610 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 PAN3Q58A45 887 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 XKR6Q5GH73 641 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 FAM76BQ5HYJ3 339 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 CTSL3PQ5NE16 218 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 CEACAM20Q6UY09 585 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 PLEKHH3Q7Z736 793 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 MICALL2Q8IY33 904 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ZNF687Q8N1G0 1237 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 UMODL1-AS1Q8N2C9 162 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ZNF527Q8NB42 609 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ARRDC2Q8TBH0 407 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 EDEM1Q92611 657 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ELP4Q96EB1 424 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 OR2A7Q96R45 310 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 C20orf85Q9H1P6 137 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ANKRD19PQ9H560 264 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SLC6A20Q9NP91 592 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 SEMA3GQ9NS98 782 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 KCND3Q9UK17 655 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 ADAMTS5Q9UNA0 930 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 PLXNB2O15031 1838 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 PATJQ8NI35 1801 aa8.55□□□□□ -1.04
SMARCE1-207ENST00000469334 MCM3APO60318 1980 aa8.54□□□□□ -1.04
SMARCE1-207ENST00000469334 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms