RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SORCS2Q96PQ0 1159 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 MYADMQ96S97 322 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 NEU1Q99519 415 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 SLC29A3Q9BZD2 475 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 ATG10Q9H0Y0 220 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 TPRKBQ9Y3C4 175 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 TMEM233B4DJY2 109 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 PRRT4C9JH25 899 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 H3BNC9 293 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 IFRD1O00458 451 aaPredicted RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 SLC7A4O43246 635 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 NCK1P16333 377 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 ZNF37AP17032 561 aaPredicted RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 SCNN1AP37088 669 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 GDF5P43026 501 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 INPP1P49441 399 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 SCAPQ12770 1279 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 PPP1R8Q12972 351 aaKnown RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 CRTC2Q53ET0 693 aaPredicted RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 SSX6Q7RTT6 188 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 TIPARPQ7Z3E1 657 aaKnown RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 NUDT13Q86X67 352 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 CELF5Q8N6W0 485 aaKnown RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 ZNF511Q8NB15 262 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 Q8NFD4 153 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 OR9A2Q8NGT5 310 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 REPS1Q96D71 796 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 ZNF436Q9C0F3 470 aaPredicted RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 MED28Q9H204 178 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 B4GALT6Q9UBX8 382 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 STUB1Q9UNE7 303 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 RUVBL1Q9Y265 456 aaKnown RBP9.45□□□□□ -0.9
NUP50-214ENST00000469163 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
NUP50-214ENST00000469163 PRAMEF33A0A0G2JMD5 474 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 GNGT2O14610 69 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 PRAMEF10O60809 474 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 TRIM3O75382 744 aaPredicted RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 ARSBP15848 533 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 LPOP22079 712 aaPredicted RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 PIGAP37287 484 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ALDH3A2P51648 485 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 RNF212Q495C1 297 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SAPCD1Q5SSQ6 148 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 CFAP161Q6P656 301 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 CCDC190Q86UF4 302 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 PIANPQ8IYJ0 282 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 UMODL1-AS1Q8N2C9 162 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 PRR18Q8N4B5 295 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 STX19Q8N4C7 294 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 OR2AP1Q8NGE2 309 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 WDR20Q8TBZ3 569 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 TMEM41AQ96HV5 264 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 RHNO1Q9BSD3 238 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 HEXA-AS1Q9H8Q6 139 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 GORASP2Q9H8Y8 452 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ELOVL2Q9NXB9 296 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 BTRCQ9Y297 605 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 YARS2Q9Y2Z4 477 aaKnown RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 SLC6A5Q9Y345 797 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ZNF451Q9Y4E5 1061 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SPTBP11277 2137 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ABCA7Q8IZY2 2146 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 AQP12BA6NM10 295 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ARHGEF33A8MVX0 844 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 PRMT5O14744 637 aaPredicted RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 LILRB5O75023 590 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 GNSP15586 552 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ATP5F1P24539 256 aaPredicted RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 RFC3P40938 356 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 KIAA1024LP59773 190 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 GLO1Q04760 184 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SKP2Q13309 424 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 FASTKQ14296 549 aaKnown RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 GK2Q14410 553 aaPredicted RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 IHHQ14623 411 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 TRAM1Q15629 374 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 RAB30Q15771 203 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 ATP13A5Q4VNC0 1218 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 PYDC2Q56P42 97 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 TEX30Q5JUR7 227 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SYT6Q5T7P8 510 aaPredicted RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 MBOAT1Q6ZNC8 495 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 CEP97Q8IW35 865 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 RGL4Q8IZJ4 473 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 C19orf18Q8NEA5 215 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 VN1R2Q8NFZ6 395 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 OR2L5Q8NG80 312 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 GPR151Q8TDV0 419 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SLC38A4Q969I6 547 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 CDKN2AIPNLQ96HQ2 116 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 FCRL5Q96RD9 977 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SLC38A3Q99624 504 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 REG4Q9BYZ8 158 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 PLA2G2FQ9BZM2 168 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 SPACA1Q9HBV2 294 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 EXOSC4Q9NPD3 245 aaKnown RBP9.44□□□□□ -0.9
NUP50-214ENST00000469163 GIMAP2Q9UG22 337 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 BTBD17A6NE02 478 aa9.44□□□□□ -0.9
NUP50-214ENST00000469163 URADA6NGE7 173 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms