RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 PRAMEF12O95522 483 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 NUDT14O95848 222 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 WNT2P09544 360 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 LAMP1P11279 417 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 ZNF131P52739 623 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 ZNF85Q03923 595 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 ZNF33BQ06732 778 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 GSG1Q2KHT4 349 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 MS4A13Q5J8X5 152 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 C1QTNF12Q5T7M4 302 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 STOX1Q6ZVD7 989 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 ZNF410Q86VK4 478 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 ACCSQ96QU6 501 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 CCT8L2Q96SF2 557 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 TMEM245Q9H330 911 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 IKZF5Q9H5V7 419 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 KCNMB3Q9NPA1 279 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 CENPMQ9NSP4 180 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 PIGVQ9NUD9 493 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 VNN3Q9NY84 501 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 VPS54Q9P1Q0 977 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 KLHDC2Q9Y2U9 406 aa3.84□□□□□ -1.79
XRN1-207ENST00000468894 EFCAB7A8K855 629 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 EEF2KO00418 725 aaKnown RBP3.83□□□□□ -1.8
XRN1-207ENST00000468894 GOSR1O95249 250 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 GJB5O95377 273 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 SLC35E2P0CK97 266 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 PVRP15151 417 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 PGAM2P15259 253 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 SAA4P35542 130 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 NSFP46459 744 aaKnown RBP3.83□□□□□ -1.8
XRN1-207ENST00000468894 PITPNBP48739 271 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 VCPP55072 806 aaKnown RBP3.83□□□□□ -1.8
XRN1-207ENST00000468894 HAND2P61296 217 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 CD226Q15762 336 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 MFSD7Q6UXD7 560 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 FAM43BQ6ZT52 329 aaPredicted RBP3.83□□□□□ -1.8
XRN1-207ENST00000468894 CCDC91Q7Z6B0 441 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 TRIM9Q9C026 710 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 ESM1Q9NQ30 184 aa3.83□□□□□ -1.8
XRN1-207ENST00000468894 NPC1L1Q9UHC9 1359 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 CHEK1O14757 476 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 ATP6V1G1O75348 118 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 PDE5AO76074 875 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 IGFBP5P24593 272 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 SHROOM1Q2M3G4 852 aaPredicted RBP3.82□□□□□ -1.8
XRN1-207ENST00000468894 TTC31Q49AM3 519 aaPredicted RBP3.82□□□□□ -1.8
XRN1-207ENST00000468894 CCDC184Q52MB2 194 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 PRAMEF7Q5VXH5 474 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 ATRAIDQ6UW56 229 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 CHCHD4Q8N4Q1 142 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 Q8N7P7 452 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 SLCO4A1Q96BD0 722 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 ZIM3Q96PE6 472 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 TEX13BQ9BXU2 312 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 ANAPC11Q9NYG5 84 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 ERVK-18Q9QC07 812 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 CLEC4EQ9ULY5 219 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 SLC9A8Q9Y2E8 581 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 RNF115Q9Y4L5 304 aa3.82□□□□□ -1.8
XRN1-207ENST00000468894 A0A1W2PNU3 283 aaPredicted RBP3.81□□□□□ -1.8
XRN1-207ENST00000468894 FAM170AA1A519 330 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 TLR4O00206 839 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 LRP3O75074 770 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 CXCL14O95715 111 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 AREGP15514 252 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 ARHGDIBP52566 201 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 NLRP11P59045 1033 aaKnown RBP3.81□□□□□ -1.8
XRN1-207ENST00000468894 ZNF79Q15937 498 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 VASH2Q86V25 355 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 GPATCH11Q8N954 259 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 DTD2Q96FN9 168 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 TRPV6Q9H1D0 765 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 MOKQ9UQ07 419 aa3.81□□□□□ -1.8
XRN1-207ENST00000468894 A8MX80 341 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 E7ENQ6 273 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 ARPC1BO15143 372 aaKnown RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 GPAA1O43292 621 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 RANBP6O60518 1105 aaKnown RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 KINO60870 393 aaKnown RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 DUSP14O95147 198 aaKnown RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 IDSP22304 550 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 IL2RGP31785 369 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 CCL11P51671 97 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 CNN1P51911 297 aaKnown RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 CCZ1BP86790 482 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 CCZ1P86791 482 aaPredicted RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 NPRL3Q12980 569 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 LASP1Q14847 261 aaKnown RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 CLPPQ16740 277 aaPredicted RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 PAN3Q58A45 887 aaKnown RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 HIST2H2AA3Q6FI13 130 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 FAM9BQ8IZU0 186 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 PYROXD2Q8N2H3 581 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 Q8N9G6 341 aaPredicted RBP3.8□□□□□ -1.8
XRN1-207ENST00000468894 LHX4Q969G2 390 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
XRN1-207ENST00000468894 B3GALT6Q96L58 329 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms