RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 NEURL1O76050 574 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 IFNA16P05015 189 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 CD1EP15812 388 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ME2P23368 584 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 TLX1P31314 330 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 CYB561P49447 251 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 NEK2P51955 445 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 STX1BP61266 288 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 OC90Q02509 493 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 MMEL1Q495T6 779 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 AGKQ53H12 422 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 CLEC6AQ6EIG7 209 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 SPINK14Q6IE38 97 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 MRM1Q6IN84 353 aaKnown RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 IZUMO2Q6UXV1 221 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 GK5Q6ZS86 529 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 MILR1Q7Z6M3 343 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 NUDT13Q86X67 352 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 SSC4DQ8WTU2 575 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 PTPMT1Q8WUK0 201 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ITFG2Q969R8 447 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ANKRD9Q96BM1 317 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 RPF2Q9H7B2 306 aaKnown RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 MID1IP1Q9NPA3 183 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ANKRD10Q9NXR5 420 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 DIDO1Q9BTC0 2240 aaKnown RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 TTC36A6NLP5 189 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 AZIN1O14977 448 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ZFAND5O76080 213 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 DDAH2O95865 285 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 TSPAN8P19075 237 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 BUD31P41223 144 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 HLCSP50747 726 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 FLOT2Q14254 428 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ZNF468Q5VIY5 522 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ZFP1Q6P2D0 407 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 TANKQ92844 425 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 PSMG3-AS1Q96PY0 264 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 TRPS1Q9UHF7 1281 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 SLC5A6Q9Y289 635 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 ATG4BQ9Y4P1 393 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 EML6Q6ZMW3 1958 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 ASPDHA6ND91 283 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 PROM1O43490 865 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 FGF17O60258 216 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 EEDO75530 441 aaKnown RBP13.44□□□□□ -0.26
COL27A1-203ENST00000468565 SP1P08047 785 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 SNRPB2P08579 225 aaKnown RBP13.44□□□□□ -0.26
COL27A1-203ENST00000468565 STT3AP46977 705 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 CDH13P55290 713 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 CLCQ05315 142 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 GSTA3Q16772 222 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 KANK2Q63ZY3 851 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 SLC25A25Q6KCM7 469 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 CYP20A1Q6UW02 462 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 LARP4Q71RC2 724 aaKnown RBP eCLIP13.44□□□□□ -0.26
COL27A1-203ENST00000468565 ELOVL6Q9H5J4 265 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 AHSPQ9NZD4 102 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 ASB4Q9Y574 426 aa13.44□□□□□ -0.26
COL27A1-203ENST00000468565 C17orf105B2RV13 164 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 TMPRSS11DO60235 418 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 CRCPO75575 148 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 SLC25A12O75746 678 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 COX7A2P14406 83 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 TNNI3P19429 210 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 PKNOX1P55347 436 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 PSME3P61289 254 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 LCP2Q13094 533 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 UGT3A2Q3SY77 523 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 C18orf63Q68DL7 685 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 LETMD1Q6P1Q0 360 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 ZNF227Q86WZ6 799 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 FAM98AQ8NCA5 519 aaKnown RBP13.43□□□□□ -0.26
COL27A1-203ENST00000468565 OR8K3Q8NH51 312 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 MTFMTQ96DP5 389 aaKnown RBP13.43□□□□□ -0.26
COL27A1-203ENST00000468565 HES7Q9BYE0 225 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 KLHL4Q9C0H6 718 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 VCXQ9H320 206 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 BRF2Q9HAW0 419 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 KLHL1Q9NR64 748 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 C6orf203Q9P0P8 240 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-203ENST00000468565 ERRFI1Q9UJM3 462 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-203ENST00000468565 ADAM29Q9UKF5 820 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 SNX6Q9UNH7 406 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 YARS2Q9Y2Z4 477 aaKnown RBP13.43□□□□□ -0.26
COL27A1-203ENST00000468565 GTF3C1Q12789 2109 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 PPP6CO00743 305 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 NME2P1O60361 137 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 ITGA10O75578 1167 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 SMNDC1O75940 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL27A1-203ENST00000468565 FAM58BPP0C7Q3 252 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 NME2P22392 152 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 ST13P50502 369 aaKnown RBP13.43□□□□□ -0.26
COL27A1-203ENST00000468565 ID2Q02363 134 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 FOLH1Q04609 750 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 CEACAM7Q14002 265 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 REP15Q6BDI9 236 aa13.43□□□□□ -0.26
COL27A1-203ENST00000468565 HSDL2Q6YN16 418 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms