RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 HSD11B2P80365 405 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC25A3Q00325 362 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PLIN5Q00G26 463 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 RHDQ02161 417 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 NHLH1Q02575 133 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 OCA2Q04671 838 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 EMX2Q04743 252 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TGM3Q08188 693 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 C2orf80Q0P641 193 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TBL3Q12788 808 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CSTF3Q12996 717 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 KLF10Q13118 480 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 MAD2L1Q13257 205 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SLAMF1Q13291 335 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC14A1Q13336 389 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TUBB3Q13509 450 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 NR1D2Q14995 579 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 NAA25Q14CX7 972 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CNN3Q15417 329 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TRIP6Q15654 476 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 HKDC1Q2TB90 917 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 AGKQ53H12 422 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 XKR7Q5GH72 579 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 KHDC1LQ5JSQ8 128 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CCNYL2Q5T2Q4 361 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 DEPDC1Q5TB30 811 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PRAMEF17Q5VTA0 474 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 C1orf189Q5VU69 101 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 KHDRBS2Q5VWX1 349 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 OR4C11Q6IEV9 310 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PPP4R4Q6NUP7 873 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 NOXRED1Q6NXP6 359 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 WDR74Q6RFH5 385 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CYP20A1Q6UW02 462 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 DHRS13Q6UX07 377 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TRPM8Q7Z2W7 1104 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 VN1R4Q7Z5H5 301 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZFAND4Q86XD8 727 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 GBP7Q8N8V2 638 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TTC29Q8NA56 475 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CAMKVQ8NCB2 501 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 FAM156AQ8NDB6 213 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TTLQ8NG68 377 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 OR8K5Q8NH50 307 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CREB3L4Q8TEY5 395 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ERP27Q96DN0 273 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 MAELQ96JY0 434 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TSSK3Q96PN8 268 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 OR2A5Q96R48 311 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CD180Q99467 661 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZBTB18Q99592 522 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CCT7Q99832 543 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CTRCQ99895 268 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 C17orf62Q9BQA9 187 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 MS4A8Q9BY19 250 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 NLNQ9BYT8 704 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 DPY30Q9C005 99 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 NMUR2Q9GZQ4 415 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 RAB33BQ9H082 229 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF768Q9H5H4 540 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SYNPO2LQ9H987 977 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 COPS7BQ9H9Q2 264 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZMAT3Q9HA38 289 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 AKIP1Q9NQ31 210 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SAR1AQ9NR31 198 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 OCIAD1Q9NX40 245 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CCDC167Q9P0B6 97 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ANKMY1Q9P2S6 941 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 EPHA6Q9UF33 1036 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 KCNE5Q9UJ90 142 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SERTAD3Q9UJW9 196 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PILRAQ9UKJ1 303 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PLCL2Q9UPR0 1127 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 MYRFQ9Y2G1 1151 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 MRPS2Q9Y399 296 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CCL27Q9Y4X3 112 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 COPG1Q9Y678 874 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 AP1M2Q9Y6Q5 423 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TP53BP1Q12888 1972 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PCDH15Q96QU1 1955 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 RALGAPA1Q6GYQ0 2036 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 VCANP13611 3396 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 A0A0A6YYC8 382 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 HYKKA2RU49 373 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 URADA6NGE7 173 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 WASHC1A8K0Z3 465 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 C4orf51C9J302 202 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 I3L1I5 382 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PSMD12O00232 456 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 NR5A2O00482 541 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PLPP1O14494 284 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 AIM2O14862 343 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CFLARO15519 480 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 FRS3O43559 492 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SRPX2O60687 465 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CBFA2T3O75081 653 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PRKRAO75569 313 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC22A3O75751 556 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms