RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, human

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR4-210	ENST00000466969	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	FOLH1B	Q9HBA9	442 aa		11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	FBXO34	Q9NWN3	711 aa		11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	HIF1AN	Q9NWT6	349 aa		11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	KLRF1	Q9NZS2	232 aa		11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	UVRAG	Q9P2Y5	699 aa		11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	DKKL1	Q9UK85	242 aa		11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	CLEC4A	Q9UMR7	237 aa		11.18	□□□□□ -0.62
UBR4-210	ENST00000466969	C2orf92	A0A1B0GVN3	265 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	OR6C76	A6NM76	312 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	HRK	O00198	91 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	SEC14L5	O43304	696 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	ICOSLG	O75144	302 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	PRB2	P02812	416 aa	Predicted RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	TACSTD2	P09758	323 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	TNNT1	P13805	278 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	RPL22	P35268	128 aa	Known RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	STT3A	P46977	705 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	LIM2	P55344	173 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	RPS3A	P61247	264 aa	Known RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	RPS13	P62277	151 aa	Known RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	RBBP5	Q15291	538 aa	Known RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	SGCB	Q16585	318 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	TTLL9	Q3SXZ7	439 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	SFRP5	Q5T4F7	317 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	DEPDC1	Q5TB30	811 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	HLA-DQA1	Q5Y7H0	255 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	E4F1	Q66K89	784 aa	Predicted RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	AGTRAP	Q6RW13	159 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	C17orf107	Q6ZR85	190 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	UBE2R2	Q712K3	238 aa	Predicted RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	KISS1R	Q969F8	398 aa	Predicted RBP	11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	TMEM186	Q96B77	213 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	CHMP5	Q9NZZ3	219 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	RIMKLB	Q9ULI2	386 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	DAPP1	Q9UN19	280 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	MGAT4B	Q9UQ53	548 aa		11.17	□□□□□ -0.62
UBR4-210	ENST00000466969	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.16	□□□□□ -0.62
UBR4-210	ENST00000466969		H0YC42	278 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	ERI3	O43414	337 aa	Known RBP	11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	LILRA1	O75019	489 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	SS18L1	O75177	396 aa	Predicted RBP	11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	AQP8	O94778	261 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	TPD52	P55327	224 aa	Predicted RBP	11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	LOXL3	P58215	753 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	HERVK_113	P63132	956 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	ERVK-8	P63133	956 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	ACVR1	Q04771	509 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	CSHL1	Q14406	222 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	CDKAL1	Q5VV42	579 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	NXPE4	Q6UWF7	544 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	RBMS3	Q6XE24	437 aa	Known RBP	11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	EXOC3L1	Q86VI1	746 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	KLHDC8B	Q8IXV7	354 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	MPP5	Q8N3R9	675 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	OTUD6B	Q8N6M0	293 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	PRELID2	Q8N945	189 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	ANKRD53	Q8N9V6	530 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	PPWD1	Q96BP3	646 aa	Known RBP	11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	FAHD2A	Q96GK7	314 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	SNF8	Q96H20	258 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	ZNF778	Q96MU6	729 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	WWC2-AS2	Q96NR7	200 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	BIRC8	Q96P09	236 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	SORCS2	Q96PQ0	1159 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	ERVK-6	Q9BXR3	956 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	C12orf49	Q9H741	205 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	GALNT9	Q9HCQ5	603 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	GALP	Q9UBC7	116 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	ERVK-19	Q9WJR5	959 aa		11.16	□□□□□ -0.62
UBR4-210	ENST00000466969	HYDIN	Q4G0P3	5121 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	CTAGE15	A4D2H0	777 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	MPC1L	P0DKB6	136 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	SUCLG1	P53597	346 aa	Known RBP	11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	CLDN15	P56746	228 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	SNTA1	Q13424	505 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	CCNI	Q14094	377 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	PPA1	Q15181	289 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	STK11	Q15831	433 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	LRRC38	Q5VT99	294 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969		Q6ZSR9	355 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	CTAGE6	Q86UF2	777 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	PLCZ1	Q86YW0	608 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	KLHDC8A	Q8IYD2	350 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	PRR22	Q8IZ63	422 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	WDSUB1	Q8N9V3	476 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	OR52K1	Q8NGK4	314 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	MUCL1	Q96DR8	90 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	MTBP	Q96DY7	904 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	SERINC2	Q96SA4	455 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	AICDA	Q9GZX7	198 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	SPNS1	Q9H2V7	528 aa		11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.15	□□□□□ -0.62
UBR4-210	ENST00000466969	BTNL10	A8MVZ5	291 aa		11.14	□□□□□ -0.63
UBR4-210	ENST00000466969	PFDN6	O15212	129 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms