RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MARCH9Q86YJ5 346 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 HS6ST3Q8IZP7 471 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 HORMAD2Q8N7B1 307 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 PPP1R16AQ96I34 528 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 SLC6A16Q9GZN6 736 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 CXorf36Q9H7Y0 433 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 CBLCQ9ULV8 474 aa18.66■□□□□ 0.58
SDF4-205ENST00000465727 GABRPO00591 440 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 TALDO1P37837 337 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 ACLYP53396 1101 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 GRK1Q15835 563 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 SYTL3Q4VX76 610 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 GPR139Q6DWJ6 353 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 MRGPREQ86SM8 312 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 LRRC28Q86X40 367 aaPredicted RBP18.65■□□□□ 0.58
SDF4-205ENST00000465727 LINC01599Q8WXQ3 324 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 HGDQ93099 445 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 RFT1Q96AA3 541 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 TMEM159Q96B96 161 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 SORCS2Q96PQ0 1159 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 GHITMQ9H3K2 345 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 SUV39H2Q9H5I1 410 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 HEXA-AS1Q9H8Q6 139 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 EXTL2Q9UBQ6 330 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 A4GNTQ9UNA3 340 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 SMAD3P84022 425 aaKnown RBP18.65■□□□□ 0.58
SDF4-205ENST00000465727 CSTF1Q05048 431 aaKnown RBP18.65■□□□□ 0.58
SDF4-205ENST00000465727 BAMBIQ13145 260 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 TMEM44Q2T9K0 475 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 HIST2H2AA3Q6FI13 130 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 ZER1Q7Z7L7 766 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 WDR48Q8TAF3 677 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 AIFM2Q9BRQ8 373 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 CLEC4MQ9H2X3 399 aaPredicted RBP18.65■□□□□ 0.58
SDF4-205ENST00000465727 MVB12BQ9H7P6 319 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 TAAR2Q9P1P5 351 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 SEC14L3Q9UDX4 400 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 SRRDQ9UH36 339 aa18.65■□□□□ 0.58
SDF4-205ENST00000465727 KDM4EB2RXH2 506 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 MMP20O60882 483 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 EFCAB14O75071 495 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 KLHL18O94889 574 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 EPHX1P07099 455 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 IL3P08700 152 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 NAGAP17050 411 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 SLC1A3P43003 542 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 TAP2Q03519 686 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 HSF2Q03933 536 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 SNTA1Q13424 505 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 SUZ12Q15022 739 aaKnown RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 CCDC85BQ15834 202 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 BCL2L15Q5TBC7 163 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 FAAH2Q6GMR7 532 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 TIGD4Q8IY51 512 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 ZNF655Q8N720 491 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 POGLUT1Q8NBL1 392 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 OR4K5Q8NGD3 323 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 RAET1EQ8TD07 263 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 TIFAQ96CG3 184 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 SLC38A2Q96QD8 506 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 OR2M2Q96R28 347 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 FNDC11Q9BVV2 318 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 RNF32Q9H0A6 362 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 NEUROD4Q9HD90 331 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 CYSLTR2Q9NS75 346 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 CUEDC1Q9NWM3 386 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 ANAPC1Q9H1A4 1944 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 CXorf51AA0A1B0GTR3 108 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 LRRTM2O43300 516 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 ELK1P19419 428 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 POU6F2P78424 691 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 CNTN1Q12860 1018 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 SLBPQ14493 270 aaKnown RBP eCLIP18.64■□□□□ 0.57
SDF4-205ENST00000465727 PRSS53Q2L4Q9 553 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 ARHGAP15Q53QZ3 475 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 TJAP1Q5JTD0 557 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 SLC27A4Q6P1M0 643 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 TNFAIP8L2Q6P589 184 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 COMMD7Q86VX2 200 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 RBM45Q8IUH3 476 aaKnown RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 ESX1Q8N693 406 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 DNAJC5GQ8N7S2 189 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 OR4D11Q8NGI4 311 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 OR5M3Q8NGP4 307 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 OR5P2Q8WZ92 322 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 SLC9A6Q92581 669 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 RFKQ969G6 155 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 VOPP1Q96AW1 172 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 KCTD12Q96CX2 325 aaKnown RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 RADILQ96JH8 1075 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 FOPNLQ96NB1 174 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 THAP7Q9BT49 309 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 ABCG5Q9H222 651 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 ZNF222Q9UK12 451 aa18.64■□□□□ 0.57
SDF4-205ENST00000465727 DNMT3AQ9Y6K1 912 aaPredicted RBP18.64■□□□□ 0.57
SDF4-205ENST00000465727 NPC1O15118 1278 aa18.63■□□□□ 0.57
SDF4-205ENST00000465727 MTX2O75431 263 aa18.63■□□□□ 0.57
SDF4-205ENST00000465727 NCR1O76036 304 aa18.63■□□□□ 0.57
SDF4-205ENST00000465727 TGFB1P01137 390 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms