RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 TBC1D20Q96BZ9 403 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 ELP4Q96EB1 424 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 FAM120BQ96EK7 910 aaKnown RBP8.25□□□□□ -1.09
UBA3-208ENST00000465627 GIMAP5Q96F15 307 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 KCTD14Q9BQ13 255 aaPredicted RBP8.25□□□□□ -1.09
UBA3-208ENST00000465627 SLC35A5Q9BS91 424 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 THUMPD3Q9BV44 507 aaKnown RBP8.25□□□□□ -1.09
UBA3-208ENST00000465627 TMEM38AQ9H6F2 299 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 GORASP2Q9H8Y8 452 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 PRM3Q9NNZ6 103 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 OCIAD1Q9NX40 245 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 HCN3Q9P1Z3 774 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 DHCR7Q9UBM7 475 aaKnown RBP8.25□□□□□ -1.09
UBA3-208ENST00000465627 NKX1-2Q9UD57 310 aaPredicted RBP8.25□□□□□ -1.09
UBA3-208ENST00000465627 ZNF639Q9UID6 485 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 SERTAD3Q9UJW9 196 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
UBA3-208ENST00000465627 A0A087WV62 115 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 RNF103-CHMP3A0A140T963 221 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 A0A1B0GX78 115 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ELOVL7A1L3X0 281 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 PRAMEF27A3QJZ7 478 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 AQP12BA6NM10 295 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 CTNSO60931 367 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 LDB3O75112 727 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ERAL1O75616 437 aaKnown RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 ANP32DO95626 131 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 C8orf89P0DMQ9 161 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 S1PR1P21453 382 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 NTSP30990 170 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 TLX1P31314 330 aaPredicted RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 MPIP34949 423 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 PTGER1P34995 402 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 FEN1P39748 380 aaKnown RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 MAGEA8P43361 318 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 AVPR1BP47901 424 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ARL4DP49703 201 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 XKP51811 444 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 NCBP2P52298 156 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBA3-208ENST00000465627 PCBP3P57721 371 aaKnown RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 SKP1P63208 163 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 MC2RQ01718 297 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 HSPB3Q12988 150 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 FADDQ13158 208 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 VEZF1Q14119 521 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 SPIDRQ14159 915 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 IL11RAQ14626 422 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 LTB4RQ15722 352 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 VMACQ2NL98 169 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 PRICKLE4Q2TBC4 344 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBA3-208ENST00000465627 PWWP2BQ6NUJ5 590 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 DGAT2L6Q6ZPD8 337 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 TTLL10Q6ZVT0 673 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 C6orf120Q7Z4R8 191 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 DHFR2Q86XF0 187 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ZC3H7AQ8IWR0 971 aaKnown RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 OR4N5Q8IXE1 308 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 AQP12AQ8IXF9 295 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ZNF595Q8IYB9 648 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 CCDC116Q8IYX3 515 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ADGRG5Q8IZF4 528 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 OR2L13Q8N349 312 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 LRRC25Q8N386 305 aaPredicted RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 TRIML2Q8N7C3 387 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 PAPD5Q8NDF8 572 aaKnown RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 SIMC1Q8NDZ2 872 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 BHLHE22Q8NFJ8 381 aaPredicted RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 OR7G2Q8NG99 324 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 OR9A2Q8NGT5 310 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 OR5AK3PQ8NH89 298 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 MMABQ96EY8 250 aaPredicted RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 PEX11GQ96HA9 241 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 OR6C1Q96RD1 312 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 BBS4Q96RK4 519 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 CDC6Q99741 560 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ECSITQ9BQ95 431 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 RSPO3Q9BXY4 272 aaPredicted RBP8.24□□□□□ -1.09
UBA3-208ENST00000465627 TGIF2Q9GZN2 237 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 DCLRE1BQ9H816 532 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 RNPEPL1Q9HAU8 725 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 S100A14Q9HCY8 104 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 APMAPQ9HDC9 416 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 FBXO8Q9NRD0 319 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 MAT2BQ9NZL9 334 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 EGFL7Q9UHF1 273 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 PSME2Q9UL46 239 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 PCDHGB4Q9UN71 923 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 CORO2BQ9UQ03 480 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 ENTPD4Q9Y227 616 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 MAP4K5Q9Y4K4 846 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 PCDHGA1Q9Y5H4 931 aa8.24□□□□□ -1.09
UBA3-208ENST00000465627 A0A1W2PNU3 283 aaPredicted RBP8.23□□□□□ -1.09
UBA3-208ENST00000465627 EVPLLA8MZ36 301 aa8.23□□□□□ -1.09
UBA3-208ENST00000465627 B4E171 279 aa8.23□□□□□ -1.09
UBA3-208ENST00000465627 ERVH48-1M5A8F1 160 aa8.23□□□□□ -1.09
UBA3-208ENST00000465627 UPK1AO00322 258 aa8.23□□□□□ -1.09
UBA3-208ENST00000465627 PLOD3O60568 738 aa8.23□□□□□ -1.09
UBA3-208ENST00000465627 FKBP6O75344 327 aa8.23□□□□□ -1.09
UBA3-208ENST00000465627 JRKO75564 520 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms