RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SAMD8Q96LT4 415 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PSMB7Q99436 277 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PYGO2Q9BRQ0 406 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 NDUFAF3Q9BU61 184 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 GPR174Q9BXC1 333 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 LRRCC1Q9C099 1032 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 DDX47Q9H0S4 455 aaKnown RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 LIME1Q9H400 295 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 AMBNQ9NP70 447 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 CLEC5AQ9NY25 188 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 SPASTQ9UBP0 616 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 COPS7AQ9UBW8 275 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 IL20RAQ9UHF4 553 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 PURGQ9UJV8 347 aaKnown RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF346Q9UL40 294 aaKnown RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ENTPD4Q9Y227 616 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF175Q9Y473 711 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 MTF2Q9Y483 593 aaPredicted RBP1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 CPQQ9Y646 472 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 AUP1Q9Y679 476 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 STYXL1Q9Y6J8 313 aa1.49□□□□□ -2.17
NUCKS1-202ENST00000464938 AFF2P51816 1311 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 RNF103-CHMP3A0A140T963 221 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 RNF222A6NCQ9 220 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF840PA6NDX5 716 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ARHGAP42A6NI28 874 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 TMCO5BA8MYB1 307 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 CYB561D2O14569 222 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ADAM12O43184 909 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 TYROBPO43914 113 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 HSF2BPO75031 334 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 DUSP11O75319 330 aaKnown RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 SRSF10O75494 262 aaKnown RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NDUFA7O95182 113 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ECDO95905 644 aaPredicted RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 TBX6O95947 436 aaPredicted RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 IGHV3-9P01782 118 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 FCGR3AP08637 254 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 GNSP15586 552 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 CAPN2P17655 700 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 GAP43P17677 238 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 RPA1P27694 616 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 PTPN6P29350 595 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 OXTRP30559 389 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 AKT2P31751 481 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 SPRP35270 261 aaPredicted RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 SAA4P35542 130 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 MATKP42679 507 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 MAGEA4P43358 317 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 RABIFP47224 123 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 VCPP55072 806 aaKnown RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 DSCR10P59022 87 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 HAND2P61296 217 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ZFP36L1Q07352 338 aaKnown RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 WASHC5Q12768 1159 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 SNX1Q13596 522 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 LTB4RQ15722 352 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 CMPK2Q5EBM0 449 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 DDI2Q5TDH0 399 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 IL23RQ5VWK5 629 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 LEMD1Q68G75 181 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 REP15Q6BDI9 236 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 FBXL22Q6P050 247 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ZCCHC12Q6PEW1 402 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 REG3GQ6UW15 175 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 KDM8Q8N371 416 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ICA1LQ8NDH6 482 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 OR56B1Q8NGI3 324 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ITLN1Q8WWA0 313 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NCLNQ969V3 563 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 SLC25A36Q96CQ1 311 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NSMCE2Q96MF7 247 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 DEFB118Q96PH6 123 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM111AQ96PZ2 611 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 KCNK16Q96T55 309 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NLNQ9BYT8 704 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NMNAT2Q9BZQ4 307 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ABCG8Q9H221 673 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 ALG9Q9H6U8 611 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 IL1RL2Q9HB29 575 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NRN1Q9NPD7 142 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NDUFA13Q9P0J0 144 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 IKZF3Q9UKT9 509 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NUDCQ9Y266 331 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 RNF115Q9Y4L5 304 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 KLF2Q9Y5W3 355 aaPredicted RBP1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 NCAPD2Q15021 1401 aa1.48□□□□□ -2.17
NUCKS1-202ENST00000464938 METP08581 1390 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 IGHV3OR16-12A0A075B7B8 117 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 A0A087WWV3 80 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 A0A0U1RQG5 324 aaPredicted RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 A0A1W2PQ72 361 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 BICDL2A1A5D9 508 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 FBLL1A6NHQ2 334 aaKnown RBP1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM220BPB1ANY3 271 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 IMPA2O14732 288 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 SSX5O60225 188 aa1.47□□□□□ -2.17
NUCKS1-202ENST00000464938 APBB3O95704 486 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms