RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 C11orf49Q9H6J7 331 aa6.9□□□□□ -1.3
USP48-206ENST00000464577 ELAC1Q9H777 363 aaKnown RBP6.9□□□□□ -1.3
USP48-206ENST00000464577 PRM3Q9NNZ6 103 aa6.9□□□□□ -1.3
USP48-206ENST00000464577 TAAR2Q9P1P5 351 aa6.9□□□□□ -1.3
USP48-206ENST00000464577 NFKBIL1Q9UBC1 381 aaPredicted RBP6.9□□□□□ -1.3
USP48-206ENST00000464577 MOSPD1Q9UJG1 213 aa6.9□□□□□ -1.3
USP48-206ENST00000464577 A4GNTQ9UNA3 340 aa6.9□□□□□ -1.3
USP48-206ENST00000464577 DYRK1BQ9Y463 629 aa6.9□□□□□ -1.3
USP48-206ENST00000464577 A0A0A6YYJ9 748 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SLC5A10A0PJK1 596 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 BTN3A3O00478 584 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 BET1O15155 118 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ADAM12O43184 909 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 AKAP8O43823 692 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 MMP20O60882 483 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 OR7A10O76100 309 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 DHFRP00374 187 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ASGR1P07306 291 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 IL3P08700 152 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 C1GALT1C1LP0DN25 315 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ANXA3P12429 323 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 STOMP27105 288 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MTNR1AP48039 350 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CYP4F8P98187 520 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TAP2Q03519 686 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 LMAN2Q12907 356 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 FOXD4Q12950 439 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 PLD1Q13393 1074 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SNAPC1Q16533 368 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CCSMST1Q4G0I0 132 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CLLU1Q5K131 121 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CD276Q5ZPR3 534 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 HIST2H2AA3Q6FI13 130 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TYW3Q6IPR3 259 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 SDE2Q6IQ49 451 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ZER1Q7Z7L7 766 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 POGLUT1Q8NBL1 392 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 OR4K5Q8NGD3 323 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 OR4D11Q8NGI4 311 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 OR52N1Q8NH53 320 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 NEIL3Q8TAT5 605 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ADAMTS19Q8TE59 1207 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SMG7Q92540 1137 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 HGDQ93099 445 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TMEM159Q96B96 161 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CASD1Q96PB1 797 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 HS3ST6Q96QI5 342 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 OR2M2Q96R28 347 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TMEM175Q9BSA9 504 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 WACQ9BTA9 647 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 JAM3Q9BX67 310 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 C1QTNF7Q9BXJ2 289 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 RSPO3Q9BXY4 272 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 SLC6A16Q9GZN6 736 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 PPIL3Q9H2H8 161 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 RERGLQ9H628 205 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MVB12BQ9H7P6 319 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 HEXA-AS1Q9H8Q6 139 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 NEUROD4Q9HD90 331 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ZFP64Q9NPA5 681 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MIEF1Q9NQG6 463 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 B4GALT6Q9UBX8 382 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SRRDQ9UH36 339 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CLCA2Q9UQC9 943 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 BACE2Q9Y5Z0 518 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 GABRPO00591 440 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 HRO43593 1189 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 EFCAB14O75071 495 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MTX2O75431 263 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 UBXN7O94888 489 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 GBAP04062 536 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 KLK1P06870 262 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 EPHX1P07099 455 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CHRM5P08912 532 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 CKBP12277 381 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 RBMS1P29558 406 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 TALDO1P37837 337 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SLC1A3P43003 542 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MTNR1BP49286 362 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ACLYP53396 1101 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CTBP2P56545 445 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TBPL1P62380 186 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CNTN1Q12860 1018 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 BAMBIQ13145 260 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MADCAM1Q13477 382 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ARHGAP15Q53QZ3 475 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MPP7Q5T2T1 576 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 GPR139Q6DWJ6 353 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TNFAIP8L2Q6P589 184 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 C22orf39Q6P5X5 142 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 LUZP2Q86TE4 346 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 LRRC28Q86X40 367 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 KIF18BQ86Y91 864 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 RBM45Q8IUH3 476 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 GRAMD2AQ8IUY3 354 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 ADGRF3Q8IZF5 1079 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CPXM2Q8N436 756 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TBC1D19Q8N5T2 526 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TRAM1L1Q8N609 369 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms