RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SNAI3Q3KNW1 292 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ANKRD55Q3KP44 614 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ZNF528Q3MIS6 628 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 LIPKQ5VXJ0 399 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 SEL1L3Q68CR1 1132 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 RAET1GQ6H3X3 334 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 IRGCQ6NXR0 463 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ARMCX5Q6P1M9 558 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ABRAXAS1Q6UWZ7 409 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 GOLGA7Q7Z5G4 137 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ADGRD2Q7Z7M1 963 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ADCK1Q86TW2 530 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 GTSCR1Q86UQ5 136 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 LUZP1Q86V48 1076 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 SLC25A42Q86VD7 318 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 AMZ2Q86W34 360 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 GPBP1Q86WP2 473 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 NBPF5PQ86XG9 351 aaPredicted RBP2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 OTUD6BQ8N6M0 293 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 OR4Q3Q8NH05 313 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 BIRC7Q96CA5 298 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 TSPAN18Q96SJ8 248 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ATOH8Q96SQ7 321 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 SOSTQ9BQB4 213 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 NDUFAF3Q9BU61 184 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ADNPQ9H2P0 1102 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 YY1AP1Q9H869 796 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 IL1RL2Q9HB29 575 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 CNOT2Q9NZN8 540 aaKnown RBP2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 IL20RAQ9UHF4 553 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 IKZF3Q9UKT9 509 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 EMCNQ9ULC0 261 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ZMYM6O95789 1325 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 FAM205AQ6ZU69 1335 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 A0A1W2PPR1 153 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 SHISA9B4DS77 424 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 K7ERI5 159 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 EI24O14681 340 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 MCF2LO15068 1137 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 SH3BGRLO75368 114 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 NUDT14O95848 222 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 HOXD4P09016 255 aaPredicted RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 CCND2P30279 289 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 MAT2AP31153 395 aaKnown RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 TRIM23P36406 574 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 SLC8A3P57103 927 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 KRTAP10-6P60371 365 aaPredicted RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 TRA2BP62995 288 aaKnown RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 HERVK_113P63132 956 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ERVK-8P63133 956 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 NOP14P78316 857 aaKnown RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 GABPB1Q06547 395 aaPredicted RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 BNIP1Q12981 228 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 PDIA5Q14554 519 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 KARSQ15046 597 aaKnown RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 CCL14Q16627 93 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 TMEM44Q2T9K0 475 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 CNPY1Q3B7I2 92 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 TTC31Q49AM3 519 aaPredicted RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ACSF3Q4G176 576 aaPredicted RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ZNF506Q5JVG8 444 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ATRAIDQ6UW56 229 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 TMEM26Q6ZUK4 368 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 P4HA3Q7Z4N8 544 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 MTERF4Q7Z6M4 381 aaKnown RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 VPS36Q86VN1 386 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 EGFL6Q8IUX8 553 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ARL14Q8N4G2 192 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 POM121L12Q8N7R1 296 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 FAM71CQ8NEG0 241 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 FLVCR1-AS1Q8TAF5 88 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 FCGR1BQ92637 280 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 TOMM40LQ969M1 308 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 WRAP53Q9BUR4 548 aaKnown RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ST6GALNAC5Q9BVH7 336 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 GPR174Q9BXC1 333 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 RAB11FIP5Q9BXF6 653 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ERVK-6Q9BXR3 956 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 EGLN1Q9GZT9 426 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 NRN1Q9NPD7 142 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ABCC13Q9NSE7 274 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 STARD5Q9NSY2 213 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 SOHLH2Q9NX45 425 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 ACTR3BQ9P1U1 418 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 FKBP7Q9Y680 259 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 CLCA3PQ9Y6N3 262 aa2.95□□□□□ -1.94
HMGXB4-205ENST00000464480 RPL37AP8A6NKH3 93 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 LGALS8O00214 317 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 ADAM12O43184 909 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 GALR3O60755 368 aaPredicted RBP2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 PDE5AO76074 875 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 STK17BO94768 372 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 SEMA4FO95754 770 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 GOT2P00505 430 aaKnown RBP2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 SNRPCP09234 159 aaKnown RBP2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 GHRP10912 638 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 DNAJB1P25685 340 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 CHRNA3P32297 505 aa2.94□□□□□ -1.94
HMGXB4-205ENST00000464480 SGSHP51688 502 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms