RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RACK1P63244 317 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 CSNK2BP67870 215 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 PUM1Q14671 1186 aaKnown RBP eCLIP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 LASP1Q14847 261 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 MICAQ29983 383 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 EXOC3L2Q2M3D2 409 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 TSPYL5Q86VY4 417 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 OR4K14Q8NGD5 310 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 OR9A2Q8NGT5 310 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 COL21A1Q96P44 957 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 SEMA6CQ9H3T2 930 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 ACER3Q9NUN7 267 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 DNAAF2Q9NVR5 837 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 SEC14L3Q9UDX4 400 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 GMPPBQ9Y5P6 360 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 SLC22A7Q9Y694 548 aa20.45■□□□□ 0.86
PDLIM2-216ENST00000464275 TMX2-CTNND1H3BSU7 103 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 J3KTA2 159 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 TLR4O00206 839 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 SLC22A1O15245 554 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 CYP4B1P13584 511 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 TBC1D25Q3MII6 688 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 C16orf87Q6PH81 154 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 LRRC25Q8N386 305 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 ABTB1Q969K4 478 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 COX4I2Q96KJ9 171 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 ZNF354BQ96LW1 612 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 PSD2Q9BQI7 771 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 GABARAPL3Q9BY60 117 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 NECTIN3Q9NQS3 549 aa20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 NDRG4Q9ULP0 352 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-216ENST00000464275 GABARAPO95166 117 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 GADD45GO95257 159 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 TYRP1P17643 537 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 AGXTP21549 392 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 MC3RP41968 323 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 LIMS1P48059 325 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 BMXP51813 675 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 PPP1CAP62136 330 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 NPRL3Q12980 569 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 PRAMEF8Q5VWM4 474 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 PRAMEF7Q5VXH5 474 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 SLC16A12Q6ZSM3 486 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 LGI4Q8N135 537 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 SPEM1Q8N4L4 309 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 RORBQ92753 470 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 FEVQ99581 238 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 CDX2Q99626 313 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 SPATA5L1Q9BVQ7 753 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 SPACA6W5XKT8 324 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 E9PQ18 207 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 ASNA1O43681 348 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 XKP51811 444 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 MAZP56270 477 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 SLC35A2P78381 396 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 OCA2Q04671 838 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 SIX5Q8N196 739 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 CAMKK1Q8N5S9 505 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 CSNK1A1LQ8N752 337 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 OR52J3Q8NH60 311 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 LMX1AQ8TE12 382 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 IPCEF1Q8WWN9 437 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 PITX2Q99697 317 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 YIPF4Q9BSR8 244 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 UCK1Q9HA47 277 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 KCND3Q9UK17 655 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 DOLKQ9UPQ8 538 aa20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 MRPS2Q9Y399 296 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-216ENST00000464275 GON4LQ3T8J9 2241 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 A0A0G2JPF8 293 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 HNRNPCL2B2RXH8 293 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 HNRNPCL3B7ZW38 293 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 BCAS1O75363 584 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 HNRNPCL4P0DMR1 293 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 MAOBP27338 520 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 FASLGP48023 281 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 RPL6Q02878 288 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 USP53Q70EK8 1073 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 PARP8Q8N3A8 854 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 ARL14Q8N4G2 192 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 SLC5A8Q8N695 610 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 FAR1Q8WVX9 515 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 C16orf58Q96GQ5 468 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 OR7D2Q96RA2 312 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 CSF3RQ99062 836 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 BTBD2Q9BX70 525 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 DGCR6LQ9BY27 220 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 NTMQ9P121 344 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 POFUT2Q9Y2G5 429 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 EYSQ5T1H1 3165 aa20.42■□□□□ 0.86
PDLIM2-216ENST00000464275 UBXN7O94888 489 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 ST6GAL1P15907 406 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 CDH3P22223 829 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 GP2P55259 537 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 VSX2P58304 361 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 LTB4RQ15722 352 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 ZNF438Q7Z4V0 828 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 ABCA7Q8IZY2 2146 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 CHPT1Q8WUD6 406 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms