RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 GPR179Q6PRD1 2367 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 IGHV5-51A0A0C4DH38 117 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 A0A1W2PPW3 197 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 PTGES3LE9PB15 166 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
COL5A1-205ENST00000464187 CASC3O15234 703 aaKnown RBP13.67□□□□□ -0.22
COL5A1-205ENST00000464187 B4GALT2O60909 372 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 RECKO95980 971 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 PNLIPP16233 465 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 ITIH1P19827 911 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 HIST1H1TP22492 207 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-205ENST00000464187 CD1CP29017 333 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 TSFMP43897 325 aaKnown RBP13.67□□□□□ -0.22
COL5A1-205ENST00000464187 GSTM5P46439 218 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 MAPK10P53779 464 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 TMBIM6P55061 237 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 CFHR1Q03591 330 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 NPRL3Q12980 569 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 HSPB3Q12988 150 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 MAD2L1BPQ15013 274 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-205ENST00000464187 CEACAM20Q6UY09 585 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 USP53Q70EK8 1073 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 PLXDC1Q8IUK5 500 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 ZNF655Q8N720 491 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-205ENST00000464187 SMYD1Q8NB12 490 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 OR8K5Q8NH50 307 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 UCN3Q969E3 161 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 GAL3ST3Q96A11 431 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 CD180Q99467 661 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 CCDC3Q9BQI4 270 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 NEUROD4Q9HD90 331 aa13.67□□□□□ -0.22
COL5A1-205ENST00000464187 KMT2EQ8IZD2 1858 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 CPED1A4D0V7 1026 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 URADA6NGE7 173 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 J3KTA2 159 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 NOL3O60936 208 aaKnown RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 DNAJB5O75953 348 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 ZNF888P0CJ79 500 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 DDX5P17844 614 aaKnown RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 NUBP1P53384 320 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 CDH12P55289 794 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 VSX2P58304 361 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 CXCR4P61073 352 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 SNRPNP63162 240 aaKnown RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 BTN3A2P78410 334 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 TGM3Q08188 693 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 SLC9A5Q14940 896 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 RPS26P11Q5JNZ5 115 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 FGD3Q5JSP0 725 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 TNFAIP8L2Q6P589 184 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 TSPYL5Q86VY4 417 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 ACOT4Q8N9L9 421 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 OR10G2Q8NGC3 310 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 ZCCHC10Q8TBK6 192 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
COL5A1-205ENST00000464187 A4GALTQ9NPC4 353 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 PCDH15Q96QU1 1955 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
COL5A1-205ENST00000464187 WDR87Q6ZQQ6 2873 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 ZSCAN9O15535 394 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-205ENST00000464187 IFNA14P01570 189 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 CERS1P27544 350 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 CSF2RBP32927 897 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 XCR1P46094 333 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 GP2P55259 537 aaKnown RBP13.65□□□□□ -0.22
COL5A1-205ENST00000464187 TRA2BP62995 288 aaKnown RBP13.65□□□□□ -0.22
COL5A1-205ENST00000464187 RPP38P78345 283 aaKnown RBP13.65□□□□□ -0.22
COL5A1-205ENST00000464187 SLC35A2P78381 396 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 SLAMF1Q13291 335 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 EXOC3L2Q2M3D2 409 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 PLA2G2CQ5R387 149 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 MANEAQ5SRI9 462 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 REEP3Q6NUK4 255 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 ZNF605Q86T29 641 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 ARMC8Q8IUR7 673 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 MCATQ8IVS2 390 aaKnown RBP13.65□□□□□ -0.22
COL5A1-205ENST00000464187 DNAJC22Q8N4W6 341 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 SLC5A8Q8N695 610 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 CSNK1A1LQ8N752 337 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 FEVQ99581 238 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 DGCR6LQ9BY27 220 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 CCDC90BQ9GZT6 254 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 DUSP21Q9H596 190 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 SOHLH2Q9NX45 425 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 ERVK-18Q9QC07 812 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 PCDHGA6Q9Y5G7 932 aa13.65□□□□□ -0.22
COL5A1-205ENST00000464187 INMTO95050 263 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ZBTB11O95625 1053 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 BCHEP06276 602 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 CTSBP07858 339 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SMIM10L1P0DMW3 83 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ITGA2P17301 1181 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 CD247P20963 164 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 KRT20P35900 424 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 MLLT3P42568 568 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 HPCAP84074 193 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 COL9A2Q14055 689 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SUZ12Q15022 739 aaKnown RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SMN1Q16637 294 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms