RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 ROR1Q01973 937 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 OC90Q02509 493 aaPredicted RBP-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 ZIC1Q15915 447 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 SYPL1Q16563 259 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 DUX4L9Q6RFH8 374 aaPredicted RBP-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 CXCL17Q6UXB2 119 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 APOOLQ6UXV4 268 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 MOB2Q70IA6 237 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 FRA10AC1Q70Z53 315 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 SLFN11Q7Z7L1 901 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 TMEM110Q86TL2 294 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 ZNF100Q8IYN0 542 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 TTC30BQ8N4P2 665 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 DUSP18Q8NEJ0 188 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 UBTD2Q8WUN7 234 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 NEIL2Q969S2 332 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 TMCO6Q96DC7 493 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 PELOQ9BRX2 385 aaKnown RBP-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 ADGRL4Q9HBW9 690 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 DUX4Q9UBX2 424 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 ZNF391Q9UJN7 358 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 TP53TG5Q9Y2B4 290 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 RPH3AQ9Y2J0 694 aaPredicted RBP-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 COL5A3P25940 1745 aaPredicted RBP-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 HIVEP1P15822 2718 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 MEGF8Q7Z7M0 2845 aa-0.11□□□□□ -2.43
TMEM56-204ENST00000463375 SHANK1Q9Y566 2161 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 RLFQ13129 1914 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 A0A1W2PQ09 198 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 AGAP14A8MT82 685 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 CSO75390 466 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 SLC25A27O95847 323 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 UGT1A5P35504 534 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 GP5P40197 560 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 CDX1P47902 265 aaPredicted RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 OTUD4Q01804 1114 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 MAP2K1Q02750 393 aaPredicted RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 PRB3Q04118 309 aaPredicted RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 MFGE8Q08431 387 aaPredicted RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 CCDC57Q2TAC2 916 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 HYIQ5T013 277 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TAF3Q5VWG9 929 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 UFSP1Q6NVU6 142 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TMEM26Q6ZUK4 368 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 STOX1Q6ZVD7 989 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 ERICH1Q86X53 443 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 MRPL24Q96A35 216 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 PTERQ96BW5 349 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 BIRC7Q96CA5 298 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 LRRC58Q96CX6 371 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 ZNF274Q96GC6 653 aaPredicted RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TSSK2Q96PF2 358 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 FEM1AQ9BSK4 669 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TSSK1BQ9BXA7 367 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TEX12Q9BXU0 123 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 MTIF3Q9H2K0 278 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 ALG9Q9H6U8 611 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 EML4Q9HC35 981 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 ESM1Q9NQ30 184 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TMOD3Q9NYL9 352 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 ANGPTL2Q9UKU9 493 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 RUVBL2Q9Y230 463 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 BSNQ9UPA5 3926 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 FAT4Q6V0I7 4981 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TNXBP22105 4242 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 SYNE1Q8NF91 8797 aaKnown RBP-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 STAB2Q8WWQ8 2551 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 TENM2Q9NT68 2774 aa-0.12□□□□□ -2.43
TMEM56-204ENST00000463375 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 KMT2CQ8NEZ4 4911 aaKnown RBP-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 GLOD5A6NK44 160 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 PTGES3LE9PB15 166 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 J3QRE1 110 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 KIAA0513O60268 411 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 PRAF2O60831 178 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 TBL1XO60907 577 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 TBX10O75333 385 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 LUC7L3O95232 432 aaKnown RBP-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 TBX18O95935 607 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 CALCAP01258 141 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 GBAP04062 536 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 GLRA1P23415 457 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 UCP1P25874 307 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 MFAP3P55082 362 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 RHBDL3P58872 404 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 DPYSL3Q14195 570 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 CD226Q15762 336 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 NTRK2Q16620 822 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 C6orf163Q5TEZ5 329 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 ENPP7Q6UWV6 458 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 BTNL8Q6UX41 500 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 Q6ZR03 302 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 PRSS48Q7RTY5 328 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 CAMKMTQ7Z624 323 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 CENPVQ7Z7K6 275 aaPredicted RBP-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 CROCCP3Q8IVE0 287 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 LINC00346Q8IVM7 164 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 C12orf56Q8IXR9 622 aa-0.13□□□□□ -2.43
TMEM56-204ENST00000463375 APCDD1Q8J025 514 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms