RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 LIN28AQ9H9Z2 209 aaKnown RBP12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SH2D2AQ9NP31 389 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 ASIC5Q9NY37 505 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 SEC14L3Q9UDX4 400 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 PTGDR2Q9Y5Y4 395 aa12.07□□□□□ -0.48
R3HDM1-213ENST00000463230 PLOD2O00469 737 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 COQ9O75208 318 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 LYPLA1O75608 230 aaPredicted RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 CBX7O95931 251 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 P04436 131 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 ZNF24P17028 368 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 DRD5P21918 477 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 MEOX1P50221 254 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 MAGOHP61326 146 aaKnown RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 MRPL49Q13405 166 aaKnown RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 PDE7AQ13946 482 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 UBAP2LQ14157 1087 aaKnown RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 NTRK2Q16620 822 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 C16orf47Q6ZP98 133 aaPredicted RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 HDXQ7Z353 690 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 FBXW8Q8N3Y1 598 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 C16orf52Q8NHV5 167 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 PAQR8Q8TEZ7 354 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 REEP4Q9H6H4 257 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 WDR91A4D1P6 747 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 TTC36A6NLP5 189 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 TP53I11O14683 189 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 TO15178 435 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 MST1P26927 711 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 PPICP45877 212 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 RPL14P50914 215 aaKnown RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 SRSF11Q05519 484 aaKnown RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 DUSP2Q05923 314 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 RFTN2Q52LD8 501 aaPredicted RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 SLC22A10Q63ZE4 541 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 FAM111BQ6SJ93 734 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 GFRALQ6UXV0 394 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 CCDC116Q8IYX3 515 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 ZFP28Q8NHY6 868 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 CDC26Q8NHZ8 85 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 BCAP29Q9UHQ4 241 aa12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 EXO1Q9UQ84 846 aaKnown RBP12.06□□□□□ -0.48
R3HDM1-213ENST00000463230 ANKRD33BA6NCL7 494 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 FRG2CA6NGY1 282 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 ACOT7O00154 380 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 STSP08842 583 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 BCKDHAP12694 445 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 H2AFXP16104 143 aaPredicted RBP12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 HPCAL1P37235 193 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 PMP22Q01453 160 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 HYAL4Q2M3T9 481 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 GALNTL6Q49A17 601 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 C6orf136Q5SQH8 315 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 ATG16L1Q676U5 607 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 TMEM81Q6P7N7 255 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 MDGA2Q7Z553 956 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 ANKRD42Q8N9B4 389 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 OR2M7Q8NG81 312 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 OR52R1Q8NGF1 315 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 PPCDCQ96CD2 204 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 LCORQ96JN0 433 aaPredicted RBP12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 BTBD9Q96Q07 612 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 SORT1Q99523 831 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 ACSS1Q9NUB1 689 aaPredicted RBP12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 ATP6V1HQ9UI12 483 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 NPFFR2Q9Y5X5 522 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 A0A1B0GUH1 482 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 PDPK1O15530 556 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 ITM2AO43736 263 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 ZNF354AO60765 605 aaPredicted RBP12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 BGNP21810 368 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 TACR1P25103 407 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 SOX18P35713 384 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 EMDP50402 254 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 NR0B1P51843 470 aaKnown RBP12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.483e-9■■■□□ 16.1
R3HDM1-213ENST00000463230 PER3P56645 1201 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 WDR4P57081 412 aaKnown RBP12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 C21orf58P58505 322 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 LTB4RQ15722 352 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 C4orf17Q53FE4 359 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 CES4AQ5XG92 561 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 GHDCQ8N2G8 530 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 OR9A2Q8NGT5 310 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 AMDHD1Q96NU7 426 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 IL1RL2Q9HB29 575 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 THAP1Q9NVV9 213 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 EIF3LQ9Y262 564 aaKnown RBP12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 SLC5A6Q9Y289 635 aa12.05□□□□□ -0.48
R3HDM1-213ENST00000463230 RP1L1Q8IWN7 2480 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 POLEQ07864 2286 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 EXPH5Q8NEV8 1989 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 FRKP42685 505 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 EMX2Q04743 252 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 BST1Q10588 318 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 DUSP8Q13202 625 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 EXOSC7Q15024 291 aaKnown RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 MLC1Q15049 377 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 RPS6KA2Q15349 733 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms