RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 STT3AP46977 705 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 NAGLUP54802 743 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 RAE1P78406 368 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 HMGCS1Q01581 520 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 FOLH1Q04609 750 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 IFFO1Q0D2I5 559 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 FOXO1Q12778 655 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CSTF3Q12996 717 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 MYBPHQ13203 477 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 HYAL4Q2M3T9 481 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF750Q32MQ0 723 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 GXYLT1Q4G148 440 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CES4AQ5XG92 561 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 TTC19Q6DKK2 380 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 SCIMPQ6UWF3 145 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 IL20RBQ6UXL0 311 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ACAD11Q709F0 780 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 TRILQ7L0X0 811 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 TGIF2LYQ8IUE0 185 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR4N5Q8IXE1 308 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 C1orf52Q8N6N3 182 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCNYL1Q8N7R7 359 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ASB15Q8WXK1 588 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 NINJ1Q92982 152 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCDC126Q96EE4 140 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZIM3Q96PE6 472 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 FAM111AQ96PZ2 611 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 SMC6Q96SB8 1091 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 GATA5Q9BWX5 397 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ALOXE3Q9BYJ1 711 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 RPF2Q9H7B2 306 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 SH2D2AQ9NP31 389 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 MID1IP1Q9NPA3 183 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 DLL4Q9NR61 685 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCM2LQ9NUG4 571 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 HPF1Q9NWY4 346 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CES1P1Q9UKY3 287 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 SNX6Q9UNH7 406 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ERVK-11Q9UQG0 969 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 STK38LQ9Y2H1 464 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 TIMM22Q9Y584 194 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 PCNX3Q9H6A9 2034 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 COL6A5A8TX70 2615 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 GLOD5A6NK44 160 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ACOT7O00154 380 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 HRKO00198 91 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 WWP2O00308 870 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 AQP7O14520 342 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 BCKDKO14874 412 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZFAND5O76080 213 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZWINTO95229 277 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 NADKO95544 446 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 KRT6AP02538 564 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 KRT6BP04259 564 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 IGKV3-11P04433 115 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CHRNGP07510 517 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCL3P10147 92 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CD99P14209 185 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 HMOX2P30519 316 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ALDH3A1P30838 453 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SOX18P35713 384 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 BUD31P41223 144 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZFP36L2P47974 494 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 KRT6CP48668 564 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 DNASE1L1P49184 302 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 PLGLB1Q02325 96 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 DUSP2Q05923 314 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 STX4Q12846 297 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SNTB1Q13884 538 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SERTAD2Q14140 314 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SPRED3Q2MJR0 410 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 KRT71Q3SY84 523 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 NDUFAF5Q5TEU4 345 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR52E8Q6IFG1 317 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF585AQ6P3V2 769 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CYP20A1Q6UW02 462 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 B3GNT6Q6ZMB0 384 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 RGS9BPQ6ZS82 235 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 GK5Q6ZS86 529 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SEM1Q6ZVN7 128 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLC22A16Q86VW1 577 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZZZ3Q8IYH5 903 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 TMEM132CQ8N3T6 1108 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 FAM109AQ8N4B1 249 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCDC63Q8NA47 563 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 GOLM1Q8NBJ4 401 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 RELL2Q8NC24 303 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR6Y1Q8NGX8 325 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR14A16Q8NHC5 309 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 METTL6Q8TCB7 284 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLC2A12Q8TD20 617 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 TCP10LQ8TDR4 215 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 DOK4Q8TEW6 326 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF721Q8TF20 911 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 TANKQ92844 425 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 TM4SF18Q96CE8 201 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 APIPQ96GX9 242 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 FAM173AQ9BQD7 235 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CNPPD1Q9BV87 410 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms