RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 EMDP50402 254 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 NR0B1P51843 470 aaKnown RBP14.63□□□□□ -0.07
ERCC3-206ENST00000462306 SRSF1Q07955 248 aaKnown RBP eCLIP14.63□□□□□ -0.075e-7■■□□□ 14
ERCC3-206ENST00000462306 PDE7AQ13946 482 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 PDCD2Q16342 344 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-206ENST00000462306 RNFT1Q5M7Z0 435 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 FHL5Q5TD97 284 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 CLEC18BQ6UXF7 455 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 FAM9CQ8IZT9 166 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 CPSF7Q8N684 471 aaKnown RBP14.63□□□□□ -0.07
ERCC3-206ENST00000462306 GOLM1Q8NBJ4 401 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 FAM98AQ8NCA5 519 aaKnown RBP14.63□□□□□ -0.07
ERCC3-206ENST00000462306 CLEC18CQ8NCF0 446 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 C17orf47Q8NEP4 570 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 OR52R1Q8NGF1 315 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 CLHC1Q8NHS4 586 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 TUBGCP3Q96CW5 907 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 ERP27Q96DN0 273 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 SPACA9Q96E40 222 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-206ENST00000462306 SGCZQ96LD1 299 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 REEP4Q9H6H4 257 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 ANKRA2Q9H9E1 313 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 SH2D2AQ9NP31 389 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 RYDENQ9NUL5 291 aaKnown RBP14.63□□□□□ -0.07
ERCC3-206ENST00000462306 PNPOQ9NVS9 261 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 BCAP29Q9UHQ4 241 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 CFL2Q9Y281 166 aa14.63□□□□□ -0.07
ERCC3-206ENST00000462306 KLRC4-KLRK1H3BQV0 150 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 AKAP10O43572 662 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 PLOD3O60568 738 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 ASMTP46597 345 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 MEOX1P50221 254 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 NCBP2P52298 156 aaKnown RBP eCLIP14.62□□□□□ -0.07
ERCC3-206ENST00000462306 GPR85P60893 370 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 EIF2S3LQ2VIR3 472 aaKnown RBP14.62□□□□□ -0.07
ERCC3-206ENST00000462306 ZNF385BQ569K4 471 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 IL23RQ5VWK5 629 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 HLA-DQA1Q5Y7H0 255 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 ANKRD26P1Q6NSI1 321 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 TMEM64Q6YI46 380 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 SIAH3Q8IW03 269 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 KIRREL3Q8IZU9 778 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 TAGAPQ8N103 731 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 LIX1Q8N485 282 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 OR7G2Q8NG99 324 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 RAB3IL1Q8TBN0 382 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 AMDHD1Q96NU7 426 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 C1orf50Q9BV19 199 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 ITPAQ9BY32 194 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 NXF5Q9H1B4 397 aaKnown RBP14.62□□□□□ -0.07
ERCC3-206ENST00000462306 GLIPR2Q9H4G4 154 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 THAP1Q9NVV9 213 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 ESPL1Q14674 2120 aa14.62□□□□□ -0.07
ERCC3-206ENST00000462306 POLEQ07864 2286 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 A0A0G2JMM0 328 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 A0A1W2PPB8 328 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 A0A1W2PRS3 328 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 PINLYPA6NC86 204 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 KIR3DP1A8MWS1 328 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 BCAS2O75934 225 aaPredicted RBP14.61□□□□□ -0.07
ERCC3-206ENST00000462306 CCL3P10147 92 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 MAPK1P28482 360 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 NTSP30990 170 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 EMX2Q04743 252 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 SMU1Q2TAY7 513 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 DND1Q8IYX4 353 aaKnown RBP14.61□□□□□ -0.07
ERCC3-206ENST00000462306 FNDC5Q8NAU1 212 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 ZFP62Q8NB50 900 aaPredicted RBP14.61□□□□□ -0.07
ERCC3-206ENST00000462306 POGLUT1Q8NBL1 392 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 PAQR8Q8TEZ7 354 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 PPCDCQ96CD2 204 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 MTERF3Q96E29 417 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 PPP1R36Q96LQ0 422 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 MANSC1Q9H8J5 431 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 AKTIPQ9H8T0 292 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 PRODH2Q9UF12 536 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 ATP6V1HQ9UI12 483 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 NPFFR2Q9Y5X5 522 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 CHCHD2Q9Y6H1 151 aaPredicted RBP14.61□□□□□ -0.07
ERCC3-206ENST00000462306 SVILO95425 2214 aa14.61□□□□□ -0.07
ERCC3-206ENST00000462306 A0A087WV62 115 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 PLOD2O00469 737 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 PDPK1O15530 556 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 NME6O75414 186 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 SASH3O75995 380 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 SLITRK5O94991 958 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 PRPS2P11908 318 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 CNR1P21554 472 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 FRKP42685 505 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 PPICP45877 212 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 OCRLQ01968 901 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 ALDH6A1Q02252 535 aaKnown RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 PTGR1Q14914 329 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 NTRK2Q16620 822 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 SLC22A10Q63ZE4 541 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 ATG16L1Q676U5 607 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 TRIM42Q8IWZ5 723 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 OR2M7Q8NG81 312 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 OR10G3Q8NGC4 313 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 PRR7Q8TB68 274 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms