RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PROM1O43490 865 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 CRYZL1O95825 349 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 LIMS3P0CW19 117 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 LIMS4P0CW20 117 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 PRKAR1AP10644 381 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
HPS3-204ENST00000462030 GABRA5P31644 462 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 RECQLP46063 649 aaPredicted RBP17.42■□□□□ 0.38
HPS3-204ENST00000462030 CLDN20P56880 219 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 SMIM11AP58511 58 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 SLC7A9P82251 487 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 LAMTOR1Q6IAA8 161 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 MZT2BQ6NZ67 158 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 SZRD1Q7Z422 152 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 FBXO15Q8NCQ5 510 aaPredicted RBP17.42■□□□□ 0.38
HPS3-204ENST00000462030 OR5H6Q8NGV6 325 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 SORCS1Q8WY21 1168 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 EXOSC8Q96B26 276 aaKnown RBP17.42■□□□□ 0.38
HPS3-204ENST00000462030 TM4SF18Q96CE8 201 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 SENP5Q96HI0 755 aaPredicted RBP17.42■□□□□ 0.38
HPS3-204ENST00000462030 ZNF607Q96SK3 696 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 NRTNQ99748 197 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 ATF6BQ99941 703 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 FNDC11Q9BVV2 318 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 NIPAL2Q9H841 368 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 TRIM45Q9H8W5 580 aaPredicted RBP17.42■□□□□ 0.38
HPS3-204ENST00000462030 FGF20Q9NP95 211 aaPredicted RBP17.42■□□□□ 0.38
HPS3-204ENST00000462030 SPG21Q9NZD8 308 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 PLAGL1Q9UM63 463 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 KIAA1549LQ6ZVL6 1849 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 WASH3PC4AMC7 463 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 CTSLP07711 333 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 MAPK9P45984 424 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 AVPR1BP47901 424 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 MAPK12P53778 367 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 CNTN1Q12860 1018 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 LHFPL3Q86UP9 236 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 SMPDL3AQ92484 453 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 UCN3Q969E3 161 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 KCNK12Q9HB15 430 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 GALNT9Q9HCQ5 603 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 CCL26Q9Y258 94 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 A0A1W2PRU2 124 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 C12orf71A8MTZ7 269 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 PRODHO43272 600 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 TRIM3O75382 744 aaPredicted RBP17.41■□□□□ 0.38
HPS3-204ENST00000462030 OR2B3O76000 313 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 EPPINO95925 133 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 FGF9P31371 208 aaPredicted RBP17.41■□□□□ 0.38
HPS3-204ENST00000462030 ABATP80404 500 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 RAB40BQ12829 278 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 COX10Q12887 443 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 SPOUT1Q5T280 376 aaKnown RBP17.41■□□□□ 0.38
HPS3-204ENST00000462030 SIGIRRQ6IA17 410 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 CD300LDQ6UXZ3 194 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.41■□□□□ 0.38
HPS3-204ENST00000462030 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
HPS3-204ENST00000462030 TBC1D19Q8N5T2 526 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 MORN4Q8NDC4 146 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 CYB5D2Q8WUJ1 264 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 MED30Q96HR3 178 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 F2RL3Q96RI0 385 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 TMEM43Q9BTV4 400 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 TMED9Q9BVK6 235 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 HDHD5Q9BXW7 423 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 PCDHGB7Q9Y5F8 929 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 ICMTO60725 284 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 SOD1P00441 154 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 ACADMP11310 421 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 ARSBP15848 533 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 EVI2BP34910 448 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 SLC6A11P48066 632 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 SMSP52788 366 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 RAB25P57735 213 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 GRIN2CQ14957 1233 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 CD200R1LQ6Q8B3 271 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 TRMT11Q7Z4G4 463 aaKnown RBP17.41■□□□□ 0.38
HPS3-204ENST00000462030 TRAPPC5Q8IUR0 188 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 OR6T1Q8NGN1 323 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 XAGE5Q8WWM1 108 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 ARHGAP9Q9BRR9 750 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 NFKBIL1Q9UBC1 381 aaPredicted RBP17.41■□□□□ 0.38
HPS3-204ENST00000462030 HSPB11Q9Y547 144 aa17.41■□□□□ 0.38
HPS3-204ENST00000462030 ISM1B1AKI9 464 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 OR3A3P47888 321 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 MTNR1AP48039 350 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 EVX1P49640 407 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 RRAS2P62070 204 aaPredicted RBP17.4■□□□□ 0.38
HPS3-204ENST00000462030 TMEM215Q68D42 235 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 C1orf94Q6P1W5 598 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 SLC36A4Q6YBV0 504 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 OR8D4Q8NGM9 314 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 QRFPRQ96P65 431 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 OR51I1Q9H343 314 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 TBC1D17Q9HA65 648 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 NEUROD4Q9HD90 331 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 MRPS18AQ9NVS2 196 aaKnown RBP17.4■□□□□ 0.38
HPS3-204ENST00000462030 ING3Q9NXR8 418 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 CXorf51AA0A1B0GTR3 108 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms