RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 OTCP00480 354 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 RPS17P08708 135 aaKnown RBP16.35■□□□□ 0.21
SSB-206ENST00000461708 GPX3P22352 226 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 ABCD3P28288 659 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 CASP3P42574 277 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 KIR2DL3P43628 341 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 TRPC1P48995 793 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 ASCL1P50553 236 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 ART1P52961 327 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 NSUN5P2Q63ZY6 315 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 TIGD3Q6B0B8 471 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 COMMD6Q7Z4G1 85 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 MILR1Q7Z6M3 343 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 VWA5B2Q8N398 1253 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 HSPBAP1Q96EW2 488 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 SH3GL2Q99962 352 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 NMRK1Q9NWW6 199 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 DNAJB12Q9NXW2 375 aaKnown RBP16.35■□□□□ 0.21
SSB-206ENST00000461708 XPR1Q9UBH6 696 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 ZNF639Q9UID6 485 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 PSME2Q9UL46 239 aa16.35■□□□□ 0.21
SSB-206ENST00000461708 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 CD8B2A6NJW9 211 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 ACOX3O15254 700 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 PPM1BO75688 479 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 TRAPPC6AO75865 159 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 ABCB1P08183 1280 aaPredicted RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 CSNK2A2P19784 350 aaPredicted RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 NT5EP21589 574 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 MASP1P48740 699 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 TRA2BP62995 288 aaKnown RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 MGAT2Q10469 447 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 SNTA1Q13424 505 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 PRICKLE4Q2TBC4 344 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 BICRALQ6AI39 1079 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 POMZP3Q6PJE2 187 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 NUP54Q7Z3B4 507 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 ZZZ3Q8IYH5 903 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 RELL2Q8NC24 303 aaPredicted RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 OR4F6Q8NGB9 312 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 FAM222BQ8WU58 562 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 RNASE6Q93091 150 aaKnown RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 CTHRC1Q96CG8 243 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 NSUN5Q96P11 429 aaKnown RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 GNRHR2Q96P88 292 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 PAFAH2Q99487 392 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 FOXC2Q99958 501 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 CXXC4Q9H2H0 198 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 MRPL46Q9H2W6 279 aaKnown RBP16.34■□□□□ 0.21
SSB-206ENST00000461708 EDARQ9UNE0 448 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 SNX6Q9UNH7 406 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
SSB-206ENST00000461708 DOCK7Q96N67 2140 aa16.34■□□□□ 0.21
SSB-206ENST00000461708 FLNAP21333 2647 aaKnown RBP16.33■□□□□ 0.21
SSB-206ENST00000461708 MED12Q93074 2177 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 ACSL3O95573 720 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 IL2RAP01589 272 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 RHOXF2BP0C7M4 288 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 KRT15P19012 456 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 DEKP35659 375 aaKnown RBP16.33■□□□□ 0.2
SSB-206ENST00000461708 DCAF7P61962 342 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 GALNT1Q10472 559 aaPredicted RBP16.33■□□□□ 0.2
SSB-206ENST00000461708 SLC30A6Q6NXT4 461 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 C17orf53Q8N3J3 647 aaPredicted RBP16.33■□□□□ 0.2
SSB-206ENST00000461708 TMEM151AQ8N4L1 468 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 NAXEQ8NCW5 288 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 TNIP2Q8NFZ5 429 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 ZNF483Q8TF39 744 aaPredicted RBP16.33■□□□□ 0.2
SSB-206ENST00000461708 POLDIP3Q9BY77 421 aaKnown RBP16.33■□□□□ 0.2
SSB-206ENST00000461708 NXF5Q9H1B4 397 aaKnown RBP16.33■□□□□ 0.2
SSB-206ENST00000461708 CDC42EP4Q9H3Q1 356 aaKnown RBP16.33■□□□□ 0.2
SSB-206ENST00000461708 CALHM2Q9HA72 323 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 MAT2BQ9NZL9 334 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 SLC12A4Q9UP95 1085 aa16.33■□□□□ 0.2
SSB-206ENST00000461708 IL18BPO95998 194 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 ACTL6AO96019 429 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 HSD3B1P14060 373 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 BMP7P18075 431 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 DRD5P21918 477 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 BMP5P22003 454 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 HSD3B2P26439 372 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 PTPN6P29350 595 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 UQCRC1P31930 480 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 IST1P53990 364 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 DAZAP2Q15038 168 aaPredicted RBP16.32■□□□□ 0.2
SSB-206ENST00000461708 WHAMMP3Q1A5X7 153 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 FLYWCH1Q4VC44 716 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 UBAP2Q5T6F2 1119 aaKnown RBP16.32■□□□□ 0.2
SSB-206ENST00000461708 LETMD1Q6P1Q0 360 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 MMGT1Q8N4V1 131 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 HGDQ93099 445 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 TM4SF18Q96CE8 201 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 ERP27Q96DN0 273 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 LCORQ96JN0 433 aaPredicted RBP16.32■□□□□ 0.2
SSB-206ENST00000461708 FAIM2Q9BWQ8 316 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 UGT2B28Q9BY64 529 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 RASSF1Q9NS23 344 aa16.32■□□□□ 0.2
SSB-206ENST00000461708 FARSBQ9NSD9 589 aaKnown RBP16.32■□□□□ 0.2
SSB-206ENST00000461708 CRIM1Q9NZV1 1036 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms