RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 KRT6CP48668 564 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 TKTL1P51854 596 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 ERVK11-1P61568 191 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 RPS4XP62701 263 aaKnown RBP3.13□□□□□ -1.91
CLK1-206ENST00000461326 RPS27AP62979 156 aaKnown RBP3.13□□□□□ -1.91
CLK1-206ENST00000461326 GSTO1P78417 241 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 IL9RQ01113 521 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 PRKCEQ02156 737 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 SPP2Q13103 211 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 ENPP2Q13822 863 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 EMC2Q15006 297 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 PARP6Q2NL67 630 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 MOB2Q70IA6 237 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 TMUB2Q71RG4 321 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 GPBP1Q86WP2 473 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 CATSPER3Q86XQ3 398 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 PYROXD2Q8N2H3 581 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 ZNF781Q8N8C0 355 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 RSPH1Q8WYR4 309 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 FCGR1BQ92637 280 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 CCDC51Q96ER9 411 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 DEFB118Q96PH6 123 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 GPA33Q99795 319 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 RBM24Q9BX46 236 aaKnown RBP3.13□□□□□ -1.91
CLK1-206ENST00000461326 TUBB1Q9H4B7 451 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 NT5DC2Q9H857 520 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 VAT1LQ9HCJ6 419 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 POLD4Q9HCU8 107 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 NUDT4Q9NZJ9 180 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 ASIC3Q9UHC3 531 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 MGAT4AQ9UM21 535 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 SPATA2Q9UM82 520 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 MGAT4BQ9UQ53 548 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 NUDCQ9Y266 331 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 SLC9A8Q9Y2E8 581 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 AQRO60306 1485 aaKnown RBP eCLIP3.13□□□□□ -1.916e-7■■□□□ 11.9
CLK1-206ENST00000461326 KIF7Q2M1P5 1343 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 CHD1O14646 1710 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 SYNJ2O15056 1496 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 IGHV3OR16-10A0A075B7F0 116 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 RGSL1A5PLK6 1076 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 H7C423 109 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 K7EQG2 157 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 PDHXO00330 501 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 PDXKO00764 312 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 ZNF749O43361 778 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 TOM1L1O75674 476 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 AKR7A3O95154 331 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 SNRPCP09234 159 aaKnown RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 SLC35G4P0C7Q5 338 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 RRASP10301 218 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 PRDX6P30041 224 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 PPP2R1BP30154 601 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 MAT2AP31153 395 aaKnown RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 SPRP35270 261 aaPredicted RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 HSF2Q03933 536 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 TAF7Q15545 349 aaPredicted RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 LRIT3Q3SXY7 679 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 VWA2Q5GFL6 755 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 LIPKQ5VXJ0 399 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 LRRC8BQ6P9F7 803 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 AFTPHQ6ULP2 937 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 TMEM26Q6ZUK4 368 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 ADGRD2Q7Z7M1 963 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 AMZ2Q86W34 360 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 MISPQ8IVT2 679 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 SAMD12Q8N8I0 201 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 ZNF397Q8NF99 534 aaPredicted RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 OR4F5Q8NH21 305 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 NABP1Q96AH0 204 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 RBM4BQ9BQ04 359 aaKnown RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 NLNQ9BYT8 704 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 RWDD1Q9H446 243 aaPredicted RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 COG4Q9H9E3 785 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 ELL3Q9HB65 397 aaPredicted RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 STARD5Q9NSY2 213 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 THAP10Q9P2Z0 257 aaPredicted RBP3.12□□□□□ -1.91
CLK1-206ENST00000461326 CTSZQ9UBR2 303 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 SEC14L4Q9UDX3 406 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 MUTYHQ9UIF7 546 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 IKZF3Q9UKT9 509 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 EMCNQ9ULC0 261 aa3.12□□□□□ -1.91
CLK1-206ENST00000461326 A0A0J9YWU9 116 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 A8MXK9 166 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 H3BTX0 84 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 SORBS2O94875 1100 aaKnown RBP3.11□□□□□ -1.91
CLK1-206ENST00000461326 POP4O95707 220 aaKnown RBP3.11□□□□□ -1.91
CLK1-206ENST00000461326 HPRP00739 348 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 CALCAP01258 141 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 HEXBP07686 556 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 FCGR3AP08637 254 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 OR9G9P0C7N8 305 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 TNNI3P19429 210 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 IL4RP24394 825 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 LMO2P25791 158 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 OXTRP30559 389 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 ID1P41134 155 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 ACAA2P42765 397 aaKnown RBP3.11□□□□□ -1.91
CLK1-206ENST00000461326 SLC1A4P43007 532 aa3.11□□□□□ -1.91
CLK1-206ENST00000461326 SGSHP51688 502 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms