RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CENPHQ9H3R5 247 aa20.73■□□□□ 0.91
TRAF4-207ENST00000461195 TUBB1Q9H4B7 451 aa20.73■□□□□ 0.91
TRAF4-207ENST00000461195 LRTM1Q9HBL6 345 aa20.73■□□□□ 0.91
TRAF4-207ENST00000461195 SSU72Q9NP77 194 aaKnown RBP20.73■□□□□ 0.91
TRAF4-207ENST00000461195 CNIH4Q9P003 139 aa20.73■□□□□ 0.91
TRAF4-207ENST00000461195 PLEKHB1Q9UF11 243 aaPredicted RBP20.73■□□□□ 0.91
TRAF4-207ENST00000461195 TRAF6Q9Y4K3 522 aa20.73■□□□□ 0.91
TRAF4-207ENST00000461195 DNAJC15Q9Y5T4 150 aa20.73■□□□□ 0.91
TRAF4-207ENST00000461195 CCL21O00585 134 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 CBX7O95931 251 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 LINC00032P0C843 101 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 ABOP16442 354 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 PCSK2P16519 638 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 GPX3P22352 226 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 SOX18P35713 384 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 DNASE1L1P49184 302 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 DUSP8Q13202 625 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 CEBPEQ15744 281 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 TRMT12Q53H54 448 aaKnown RBP20.72■□□□□ 0.91
TRAF4-207ENST00000461195 ZNF628Q5EBL2 1059 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 CMPK2Q5EBM0 449 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 Q6ZSR9 355 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 IKBIPQ70UQ0 350 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 EXOC3L1Q86VI1 746 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 SLC22A16Q86VW1 577 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 FBXW8Q8N3Y1 598 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 OR10G3Q8NGC4 313 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 OR52R1Q8NGF1 315 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 OR52N2Q8NGI0 321 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 IL1RL2Q9HB29 575 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 MIEF1Q9NQG6 463 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 SUCOQ9UBS9 1254 aaKnown RBP20.72■□□□□ 0.91
TRAF4-207ENST00000461195 PRODH2Q9UF12 536 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 SH3BGRL2Q9UJC5 107 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 DTX4Q9Y2E6 619 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 NPFFR2Q9Y5X5 522 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 CHCHD2Q9Y6H1 151 aaPredicted RBP20.72■□□□□ 0.91
TRAF4-207ENST00000461195 DOPEY1Q5JWR5 2465 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 CENPEQ02224 2701 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 GTF3C1Q12789 2109 aa20.72■□□□□ 0.91
TRAF4-207ENST00000461195 A1L4Q6 167 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 FAM166BA8MTA8 275 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 CDC40O60508 579 aaKnown RBP eCLIP20.71■□□□□ 0.919e-6■■■□□ 15.9
TRAF4-207ENST00000461195 BCAS2O75934 225 aaPredicted RBP20.71■□□□□ 0.91
TRAF4-207ENST00000461195 GLSO94925 669 aaPredicted RBP20.71■□□□□ 0.91
TRAF4-207ENST00000461195 MPIP34949 423 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 PIGAP37287 484 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 TMED10P49755 219 aaKnown RBP20.71■□□□□ 0.91
TRAF4-207ENST00000461195 MRPS35P82673 323 aaKnown RBP20.71■□□□□ 0.91
TRAF4-207ENST00000461195 C3AR1Q16581 482 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 SH2D4BQ5SQS7 431 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 TMEM64Q6YI46 380 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 TICAM1Q8IUC6 712 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 CHERPQ8IWX8 916 aaKnown RBP20.71■□□□□ 0.91
TRAF4-207ENST00000461195 DDIASQ8IXT1 998 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 SIMC1Q8NDZ2 872 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 OR5M3Q8NGP4 307 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 OR9A2Q8NGT5 310 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 OR2T11Q8NH01 316 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 TWIST2Q8WVJ9 160 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 ERP27Q96DN0 273 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 BBS4Q96RK4 519 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 TINAGQ9UJW2 476 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 MYO7BQ6PIF6 2116 aa20.71■□□□□ 0.91
TRAF4-207ENST00000461195 EXPH5Q8NEV8 1989 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 TMEM233B4DJY2 109 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 TP53I11O14683 189 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 ZG16O60844 167 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 SERPINB4P48594 390 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 FOXO1Q12778 655 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 RPS6KA2Q15349 733 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 UGT3A2Q3SY77 523 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 TNFAIP8L3Q5GJ75 292 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 PRAMEF20Q5VT98 475 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 MTFR2Q6P444 385 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 LRIG3Q6UXM1 1119 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 NUDCD3Q8IVD9 361 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 FAM9CQ8IZT9 166 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 OR6Y1Q8NGX8 325 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 AGR3Q8TD06 166 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 KAT2AQ92830 837 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 ITPAQ9BY32 194 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 NXF5Q9H1B4 397 aaKnown RBP20.7■□□□□ 0.9
TRAF4-207ENST00000461195 DEFB127Q9H1M4 99 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 ZDHHC11Q9H8X9 412 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 PLSCR2Q9NRY7 297 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 TUBA8Q9NY65 449 aaPredicted RBP20.7■□□□□ 0.9
TRAF4-207ENST00000461195 TAS2R7Q9NYW3 318 aa20.7■□□□□ 0.9
TRAF4-207ENST00000461195 CNOT11Q9UKZ1 510 aaKnown RBP20.7■□□□□ 0.9
TRAF4-207ENST00000461195 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.7■□□□□ 0.9
TRAF4-207ENST00000461195 A0A1B0GTH9 108 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 MYO1GB0I1T2 1018 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 TM9SF1O15321 606 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 ERLIN1O75477 346 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 MYZAPP0CAP1 466 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 ABCD3P28288 659 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 EMDP50402 254 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 FBXW4P57775 412 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 DCAF7P61962 342 aa20.69■□□□□ 0.9
TRAF4-207ENST00000461195 KCNJ2P63252 427 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms