RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RAPSNQ13702 412 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 GAMTQ14353 236 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 PDK1Q15118 436 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 TRADDQ15628 312 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 HAGHQ16775 308 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 PARP10Q53GL7 1025 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 UNC50Q53HI1 259 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 HIST2H2AA3Q6FI13 130 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 STEAP1BQ6NZ63 245 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 STXBP4Q6ZWJ1 553 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 MIER3Q7Z3K6 550 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 DEFB132Q7Z7B7 95 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 YRDCQ86U90 279 aaKnown RBP2.71□□□□□ -1.98
RFC4-211ENST00000460408 ELMOD2Q8IZ81 293 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 CHCHD4Q8N4Q1 142 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 C4orf32Q8N8J7 132 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 COLGALT1Q8NBJ5 622 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 FLVCR1-AS1Q8TAF5 88 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 RDH11Q8TC12 318 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 ACCSQ96QU6 501 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 COQ7Q99807 217 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 ST6GALNAC5Q9BVH7 336 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 FTHL17Q9BXU8 183 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 HEXA-AS1Q9H8Q6 139 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 JPT2Q9H910 190 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 Q9HAA7 133 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 STARD5Q9NSY2 213 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 NINJ2Q9NZG7 142 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 VPS54Q9P1Q0 977 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 COPS7AQ9UBW8 275 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 MOB4Q9Y3A3 225 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 MSH6P52701 1360 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 KIF14Q15058 1648 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 BCL9LQ86UU0 1499 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 RPGRIP1LQ68CZ1 1315 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CHD4Q14839 1912 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 IQGAP1P46940 1657 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 SCAPERQ9BY12 1400 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 DISP1Q96F81 1524 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 FAM135AQ9P2D6 1515 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 A0A0A6YYD4 124 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 IGKV3D-20A0A0C4DH25 116 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CFAP73A6NFT4 308 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ADAM12O43184 909 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 DUSP11O75319 330 aaKnown RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 CRLF1O75462 422 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 HPRP00739 348 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 HOXD4P09016 255 aaPredicted RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 HIST1H2AGP0C0S8 130 aaPredicted RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 MBL2P11226 248 aaPredicted RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 IL10P22301 178 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 IL4RP24394 825 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 AKT2P31751 481 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 SLC1A4P43007 532 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 RABIFP47224 123 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 NOVP48745 357 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 MS4A2Q01362 244 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ACY1Q03154 408 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CLPPQ16740 277 aaPredicted RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 PCK2Q16822 640 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ZSWIM7Q19AV6 140 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CMPK2Q5EBM0 449 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 OR6B2Q6IFH4 312 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CNSTQ6PJW8 725 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 FAM159AQ6UWV7 190 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 MFSD7Q6UXD7 560 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 WDR88Q6ZMY6 472 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CATSPER3Q86XQ3 398 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 LINC00518Q8N0U6 118 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 HDDC3Q8N4P3 179 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ZNF491Q8N8L2 437 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CSNK1G2-AS1Q8NCQ2 148 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ICA1LQ8NDH6 482 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 DQX1Q8TE96 717 aaKnown RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 HIST1H2ACQ93077 130 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 TMEM45BQ96B21 275 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 MRPL38Q96DV4 380 aaKnown RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 HSD17B14Q9BPX1 270 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CBWD1Q9BRT8 395 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 TRIM6Q9C030 488 aaPredicted RBP2.7□□□□□ -1.98
RFC4-211ENST00000460408 HSD3B7Q9H2F3 369 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ADNPQ9H2P0 1102 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 HPS4Q9NQG7 708 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ERVK-18Q9QC07 812 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 SPASTQ9UBP0 616 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 MIOXQ9UGB7 285 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 TUBGCP4Q9UGJ1 667 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 CCPG1Q9ULG6 757 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ENTPD4Q9Y227 616 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 PLEKHA6Q9Y2H5 1048 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 SLC6A5Q9Y345 797 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 FBXO7Q9Y3I1 522 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 AUP1Q9Y679 476 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 MED14O60244 1454 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ATP10BO94823 1461 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 ZNF518AQ6AHZ1 1483 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 NEURL4Q96JN8 1562 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 REREQ9P2R6 1566 aa2.7□□□□□ -1.98
RFC4-211ENST00000460408 SHPRHQ149N8 1683 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms