RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 DUSP8Q13202 625 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 PACS2Q86VP3 889 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 KLHL29Q96CT2 875 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 ZNF559Q9BR84 538 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 FAIM2Q9BWQ8 316 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 BRINP2Q9C0B6 783 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 MAT2BQ9NZL9 334 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 ZNF225Q9UK10 706 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 ITGB1BP2Q9UKP3 347 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 PSME2Q9UL46 239 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 DTX4Q9Y2E6 619 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 C15orf41Q9Y2V0 281 aa20.87■□□□□ 0.93
PTPN4-207ENST00000460162 C15orf38-AP3S2A0A0A6YYH1 394 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 ERAL1O75616 437 aaKnown RBP20.86■□□□□ 0.93
PTPN4-207ENST00000460162 OR4F21O95013 312 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 HPNP05981 417 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 NAGAP17050 411 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 CASP3P42574 277 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 TRPC1P48995 793 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 CRYZQ08257 329 aaKnown RBP20.86■□□□□ 0.93
PTPN4-207ENST00000460162 MAP4K2Q12851 820 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 CSTF3Q12996 717 aaKnown RBP20.86■□□□□ 0.93
PTPN4-207ENST00000460162 RASA2Q15283 850 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 BICRALQ6AI39 1079 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 TMEM81Q6P7N7 255 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 TIFABQ6ZNK6 161 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 PRR22Q8IZ63 422 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 C1orf52Q8N6N3 182 aaKnown RBP20.86■□□□□ 0.93
PTPN4-207ENST00000460162 TM4SF18Q96CE8 201 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 TMEM41AQ96HV5 264 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 ZNF382Q96SR6 550 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 NXF5Q9H1B4 397 aaKnown RBP20.86■□□□□ 0.93
PTPN4-207ENST00000460162 ZNF639Q9UID6 485 aa20.86■□□□□ 0.93
PTPN4-207ENST00000460162 ANKHD1Q8IWZ3 2542 aaKnown RBP20.86■□□□□ 0.93
PTPN4-207ENST00000460162 SUPT7LO94864 414 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 KRT6AP02538 564 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 KRT6BP04259 564 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 HSD17B3P37058 310 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 FEN1P39748 380 aaKnown RBP20.85■□□□□ 0.93
PTPN4-207ENST00000460162 KRT6CP48668 564 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 CDK9P50750 372 aaKnown RBP20.85■□□□□ 0.93
PTPN4-207ENST00000460162 MGAT2Q10469 447 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 ZNF678Q5SXM1 525 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 TEX35Q5T0J7 233 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 FNDC7Q5VTL7 733 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 LIX1LQ8IVB5 337 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 MMP21Q8N119 569 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 CTHRC1Q96CG8 243 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 NTNG2Q96CW9 530 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 TMEM237Q96Q45 408 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 HBEGFQ99075 208 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 ITPAQ9BY32 194 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 VPS29Q9UBQ0 182 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 STK38LQ9Y2H1 464 aa20.85■□□□□ 0.93
PTPN4-207ENST00000460162 HIVEP1P15822 2718 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 HSPB2A8KAH6 182 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 AHRRA9YTQ3 701 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 MANBAO00462 879 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 ACOX3O15254 700 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 PPM1BO75688 479 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 ABCB1P08183 1280 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-207ENST00000460162 GCAP28676 217 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 MYBPHQ13203 477 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 HSPB2Q16082 182 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 NNATQ16517 81 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 ACSF3Q4G176 576 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-207ENST00000460162 CES4AQ5XG92 561 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 FAM111BQ6SJ93 734 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 TRMT10CQ7L0Y3 403 aaKnown RBP20.84■□□□□ 0.93
PTPN4-207ENST00000460162 WDR53Q7Z5U6 358 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-207ENST00000460162 TMEM200AQ86VY9 491 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 PM20D2Q8IYS1 436 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 CNPY4Q8N129 248 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 CDYL2Q8N8U2 506 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 HSPBAP1Q96EW2 488 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 LCORQ96JN0 433 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-207ENST00000460162 PRDM14Q9GZV8 571 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 METTL7AQ9H8H3 244 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 TMEM216Q9P0N5 145 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 BCAP29Q9UHQ4 241 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 MCM8Q9UJA3 840 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 NFU1Q9UMS0 254 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 ZNF780BQ9Y6R6 833 aa20.84■□□□□ 0.93
PTPN4-207ENST00000460162 KIF2AO00139 706 aaPredicted RBP20.83■□□□□ 0.93
PTPN4-207ENST00000460162 TRAPPC6AO75865 159 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 CBX7O95931 251 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 PEX19P40855 299 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 ALDH9A1P49189 494 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 DCAF7P61962 342 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 PLCXD2Q0VAA5 305 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 EXOSC7Q15024 291 aaKnown RBP20.83■□□□□ 0.93
PTPN4-207ENST00000460162 SF3B4Q15427 424 aaKnown RBP eCLIP20.83■□□□□ 0.93
PTPN4-207ENST00000460162 TESK1Q15569 626 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 UNC50Q53HI1 259 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 NHSL2Q5HYW2 709 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 TCHHL1Q5QJ38 904 aaPredicted RBP20.83■□□□□ 0.93
PTPN4-207ENST00000460162 GPRIN3Q6ZVF9 776 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 SEM1Q6ZVN7 128 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 LACC1Q8IV20 430 aa20.83■□□□□ 0.93
PTPN4-207ENST00000460162 CNRIP1Q96F85 164 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms