RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 GDI1P31150 447 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 CLDN2P57739 230 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 UBE3AQ05086 875 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 RTL10Q7L3V2 364 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 VRK2Q86Y07 508 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 ARSGQ96EG1 525 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 LRR1Q96L50 414 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 CDCA4Q9BXL8 241 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 POLR2J2Q9GZM3 115 aaKnown RBP17.1■□□□□ 0.33
HPS3-202ENST00000460120 EHD3Q9NZN3 535 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 GPR55Q9Y2T6 319 aaPredicted RBP17.1■□□□□ 0.33
HPS3-202ENST00000460120 RBMX2Q9Y388 322 aaKnown RBP17.1■□□□□ 0.33
HPS3-202ENST00000460120 ALPK3Q96L96 1907 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 DSPPQ9NZW4 1301 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 COL4A3Q01955 1670 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3DA0A087WVF3 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3IA0A087WXS9 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3KA0A087X1G2 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3FA6NER0 549 aaPredicted RBP17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3LB9A6J9 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3HP0C7X1 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 SOX6P35712 828 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 GSTM5P46439 218 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TPTEP56180 551 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 ILKQ13418 452 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3GQ6DHY5 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3CQ6IPX1 549 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 OR4N5Q8IXE1 308 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TBC1D3Q8IZP1 549 aaPredicted RBP17.1■□□□□ 0.33
HPS3-202ENST00000460120 SHISA5Q8N114 240 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 KCT2Q8NC54 265 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 SIMC1Q8NDZ2 872 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 MS4A6EQ96DS6 147 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 TMEM80Q96HE8 168 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 FAIM2Q9BWQ8 316 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 ASPNQ9BXN1 380 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 ACSL5Q9ULC5 683 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 GPC6Q9Y625 555 aaPredicted RBP17.1■□□□□ 0.33
HPS3-202ENST00000460120 SCN3AQ9NY46 2000 aa17.1■□□□□ 0.33
HPS3-202ENST00000460120 SH3D21A4FU49 640 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 A8MVJ9 347 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 AQP9O43315 295 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 MPZL2O60487 215 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 CEACAM5P06731 702 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 HIST1H1TP22492 207 aaPredicted RBP17.09■□□□□ 0.33
HPS3-202ENST00000460120 AK4P27144 223 aaPredicted RBP17.09■□□□□ 0.33
HPS3-202ENST00000460120 HSD17B2P37059 387 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 SPHARQ15513 63 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 SLX4IPQ5VYV7 408 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 GIN1Q9NXP7 522 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 ENTPD4Q9Y227 616 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 YARS2Q9Y2Z4 477 aaKnown RBP17.09■□□□□ 0.33
HPS3-202ENST00000460120 EML2O95834 649 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 HBQ1P09105 142 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 ATXN8OSP0DMR3 200 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 RPS19P39019 145 aaKnown RBP17.09■□□□□ 0.33
HPS3-202ENST00000460120 FRKP42685 505 aaPredicted RBP17.09■□□□□ 0.33
HPS3-202ENST00000460120 BTN3A2P78410 334 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 HYAL2Q12891 473 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 SNAPC1Q16533 368 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 OR8H2Q8N162 312 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 SUN3Q8TAQ9 357 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 ZCCHC10Q8TBK6 192 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 SLC25A19Q9HC21 320 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 TOR4AQ9NXH8 423 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 CNOT2Q9NZN8 540 aaKnown RBP17.09■□□□□ 0.33
HPS3-202ENST00000460120 DPP7Q9UHL4 492 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 SLC9A8Q9Y2E8 581 aa17.09■□□□□ 0.33
HPS3-202ENST00000460120 BTN3A3O00478 584 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 MYL12BO14950 172 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 CLEC3AO75596 197 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 PEBP1P30086 187 aaKnown RBP17.08■□□□□ 0.33
HPS3-202ENST00000460120 CSTF2P33240 577 aaKnown RBP eCLIP17.08■□□□□ 0.331e-6■■■□□ 19.1
HPS3-202ENST00000460120 KHKP50053 298 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 TAS2R41P59536 307 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 CHRNEQ04844 493 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 SPANXN2Q5MJ10 180 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 ZFP41Q8N8Y5 198 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 C9orf43Q8TAL5 461 aaPredicted RBP17.08■□□□□ 0.33
HPS3-202ENST00000460120 SLC9A6Q92581 669 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 PHOX2BQ99453 314 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 MAN2C1Q9NTJ4 1040 aa17.08■□□□□ 0.33
HPS3-202ENST00000460120 ACSS1Q9NUB1 689 aaPredicted RBP17.08■□□□□ 0.33
HPS3-202ENST00000460120 APOBEC3BQ9UH17 382 aaKnown RBP17.08■□□□□ 0.33
HPS3-202ENST00000460120 SYNDIG1LA6NDD5 238 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 H0Y8X5 98 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 MED26O95402 600 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 TP53P04637 393 aaPredicted RBP17.08■□□□□ 0.32
HPS3-202ENST00000460120 ALOX5P09917 674 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 EN2P19622 333 aaPredicted RBP17.08■□□□□ 0.32
HPS3-202ENST00000460120 NKX2-5P52952 324 aaPredicted RBP17.08■□□□□ 0.32
HPS3-202ENST00000460120 C6orf132Q5T0Z8 1188 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 OR2G6Q5TZ20 316 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 KIAA1161Q6NSJ0 714 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 OR2L3Q8NG85 312 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 OTULINQ96BN8 352 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms