RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 LIPGQ9Y5X9 500 aa15.17■□□□□ 0.02
SHANK2-213ENST00000460048 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.17■□□□□ 0.02
SHANK2-213ENST00000460048 A0A1B0GVC2 190 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 ANKRD33BA6NCL7 494 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 CAPN14A8MX76 684 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 PRSS44E7EML9 344 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 TPOP07202 933 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 UROSP10746 265 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 HEPACAMQ14CZ8 416 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 EXOSC7Q15024 291 aaKnown RBP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 TRMT12Q53H54 448 aaKnown RBP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 EMC4Q5J8M3 183 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 SP5Q6BEB4 398 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 C3P1Q6ZMU1 363 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 GATA5Q9BWX5 397 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 EBPLQ9BY08 206 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 ROPN1BQ9BZX4 212 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 NXF5Q9H1B4 397 aaKnown RBP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 ROPN1Q9HAT0 212 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-213ENST00000460048 EHD3Q9NZN3 535 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 ENTPD4Q9Y227 616 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 CFL2Q9Y281 166 aa15.16■□□□□ 0.02
SHANK2-213ENST00000460048 CELSR2Q9HCU4 2923 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 LRRC3CA6NJW4 275 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 NPIPB8E9PQR5 432 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 TRIM13O60858 407 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 RSL1D1O76021 490 aaKnown RBP15.15■□□□□ 0.02
SHANK2-213ENST00000460048 CELA3AP09093 270 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ANXA4P09525 319 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-213ENST00000460048 PCSK2P16519 638 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ABCD3P28288 659 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 GRNP28799 593 aaKnown RBP15.15■□□□□ 0.02
SHANK2-213ENST00000460048 SMSP52788 366 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 NRG3P56975 720 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 FBXW4P57775 412 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ZNF763Q0D2J5 394 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 RPS6KA2Q15349 733 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 IMPG1Q17R60 797 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ZNF628Q5EBL2 1059 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 SPDYAQ5MJ70 313 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 TBCELQ5QJ74 424 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 TRILQ7L0X0 811 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 CCDC116Q8IYX3 515 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 SAMD14Q8IZD0 417 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-213ENST00000460048 EID3Q8N140 333 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 OR5M3Q8NGP4 307 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 SPPL2AQ8TCT8 520 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 NTNG2Q96CW9 530 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 SECISBP2Q96T21 854 aaKnown RBP15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ITPAQ9BY32 194 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 SHCBP1LQ9BZQ2 653 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ZNF703Q9H7S9 590 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ZFP64Q9NPA5 681 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 BCAP29Q9UHQ4 241 aa15.15■□□□□ 0.02
SHANK2-213ENST00000460048 BOKQ9UMX3 212 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-213ENST00000460048 ATP6AP2A0A1C7CYW4 349 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 OR14I1A6ND48 311 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 TP53I11O14683 189 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 SUSD5O60279 629 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 TRIM3O75382 744 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 CRCPO75575 148 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 ATP6AP2O75787 350 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 LRATO95237 230 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 RFPL3SP0C7P2 107 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 NAGAP17050 411 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 PRPH2P23942 346 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 ALDH3A1P30838 453 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 TMED10P49755 219 aaKnown RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 EMDP50402 254 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 KCNJ2P63252 427 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 MRPS35P82673 323 aaKnown RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 IFFO1Q0D2I5 559 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 SLC10A1Q14973 349 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 KIAA0040Q15053 153 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 CDSNQ15517 529 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 PRSS53Q2L4Q9 553 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 ZNF630Q2M218 657 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 CLEC6AQ6EIG7 209 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 RNF165Q6ZSG1 346 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 SRRM1Q8IYB3 904 aaKnown RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 PRR22Q8IZ63 422 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 MARVELD2Q8N4S9 558 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 MREGQ8N565 214 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 OR52R1Q8NGF1 315 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 DIO2Q92813 273 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 EXOSC8Q96B26 276 aaKnown RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 ERP27Q96DN0 273 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 METTL2AQ96IZ6 378 aaKnown RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 LCORQ96JN0 433 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 TRMOQ9BU70 441 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 TMEM109Q9BVC6 243 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 IQCGQ9H095 443 aaKnown RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 TP63Q9H3D4 680 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 MYNNQ9NPC7 610 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 RRAGDQ9NQL2 400 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-213ENST00000460048 SLC35C2Q9NQQ7 365 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 QPCTLQ9NXS2 382 aa15.14■□□□□ 0.01
SHANK2-213ENST00000460048 SLC17A7Q9P2U7 560 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms