RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 GHDCQ8N2G8 530 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 GOLM1Q8NBJ4 401 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 SGCZQ96LD1 299 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 ZNF681Q96N22 645 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 FAM173AQ9BQD7 235 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 NXF5Q9H1B4 397 aaKnown RBP17.23■□□□□ 0.35
USP39-209ENST00000458268 TUBA8Q9NY65 449 aaPredicted RBP17.23■□□□□ 0.35
USP39-209ENST00000458268 EHD3Q9NZN3 535 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 BAIAP2L1Q9UHR4 511 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 ZDHHC2Q9UIJ5 367 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 TINAGQ9UJW2 476 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 NINQ8N4C6 2090 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 USP9XQ93008 2570 aaPredicted RBP17.23■□□□□ 0.35
USP39-209ENST00000458268 MYO7BQ6PIF6 2116 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 HECTD1Q9ULT8 2610 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 PTPN13Q12923 2485 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 CCL21O00585 134 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 ITM2AO43736 263 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 PEX11AO75192 247 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 CBX7O95931 251 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 S1PR1P21453 382 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 MPIP34949 423 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 GSTM5P46439 218 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 PER3P56645 1201 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 MGAT2Q10469 447 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 DUSP8Q13202 625 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 C3AR1Q16581 482 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 PRSS53Q2L4Q9 553 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 ZNF791Q3KP31 576 aaPredicted RBP17.22■□□□□ 0.35
USP39-209ENST00000458268 KRTCAP3Q53RY4 240 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 FAM71E1Q6IPT2 247 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 LYPD8Q6UX82 237 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 Q6ZSR9 355 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 SIAH3Q8IW03 269 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 SAMD14Q8IZD0 417 aaPredicted RBP17.22■□□□□ 0.35
USP39-209ENST00000458268 SLC15A4Q8N697 577 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 OR52N2Q8NGI0 321 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 DIO2Q92813 273 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 C11orf24Q96F05 449 aaPredicted RBP17.22■□□□□ 0.35
USP39-209ENST00000458268 C1orf50Q9BV19 199 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 TTTY12Q9BZ98 90 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 ZNF395Q9H8N7 513 aaPredicted RBP17.22■□□□□ 0.35
USP39-209ENST00000458268 SIRT5Q9NXA8 310 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 CFL2Q9Y281 166 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 CCL27Q9Y4X3 112 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 NPFFR2Q9Y5X5 522 aa17.22■□□□□ 0.35
USP39-209ENST00000458268 GTF3C1Q12789 2109 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 A0A1B0GTH9 108 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 A0A1B0GUH1 482 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 TP53I11O14683 189 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 TM9SF1O15321 606 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 ZG16O60844 167 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 LDLRP01130 860 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 SERPINE1P05121 402 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 STSP08842 583 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 FBXO45P0C2W1 286 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 ESRRAP11474 423 aaPredicted RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 SDC1P18827 310 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 BGNP21810 368 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 SERPINB5P36952 375 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 PLCXD2Q0VAA5 305 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 ZNF155Q12901 538 aaPredicted RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 PDCD2Q16342 344 aaPredicted RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 RFTN2Q52LD8 501 aaPredicted RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 ZNF628Q5EBL2 1059 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 BICRALQ6AI39 1079 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 HIST2H2BCQ6DN03 193 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 TMEM107Q6UX40 140 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 C3P1Q6ZMU1 363 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 SZRD1Q7Z422 152 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 ZFP62Q8NB50 900 aaPredicted RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 FAM76AQ8TAV0 307 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 PGM2Q96G03 612 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 STMN4Q9H169 189 aaPredicted RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 EXO5Q9H790 373 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 SH3BP4Q9P0V3 963 aa17.21■□□□□ 0.35
USP39-209ENST00000458268 SUCOQ9UBS9 1254 aaKnown RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.21■□□□□ 0.35
USP39-209ENST00000458268 POLEQ07864 2286 aa17.21■□□□□ 0.34
USP39-209ENST00000458268 CAPN14A8MX76 684 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 LSM1O15116 133 aaKnown RBP17.2■□□□□ 0.34
USP39-209ENST00000458268 ZWINTO95229 277 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 TPOP07202 933 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 EFNA1P20827 205 aaPredicted RBP17.2■□□□□ 0.34
USP39-209ENST00000458268 GPC1P35052 558 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 MC3RP41968 323 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 MAGEA5P43359 124 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 TMED10P49755 219 aaKnown RBP17.2■□□□□ 0.34
USP39-209ENST00000458268 HSPB3Q12988 150 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 MPP2Q14168 576 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 RPS6KA2Q15349 733 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 ATP6AP1LQ52LC2 224 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 CMPK2Q5EBM0 449 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 BEND6Q5SZJ8 279 aaPredicted RBP17.2■□□□□ 0.34
USP39-209ENST00000458268 CES4AQ5XG92 561 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 SLC22A16Q86VW1 577 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 ZNF441Q8N8Z8 693 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 OR7G2Q8NG99 324 aa17.2■□□□□ 0.34
USP39-209ENST00000458268 ADIPOR1Q96A54 375 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms