RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CYP4X1Q8N118 509 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 METTL4Q8N3J2 472 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM156Q8N614 296 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SLC39A7Q92504 469 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PHYHIPLQ96FC7 376 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZFP3Q96NJ6 502 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GPR83Q9NYM4 423 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ATF5Q9Y2D1 282 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 KCNU1A8MYU2 1149 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 C17orf112F2Z3M2 114 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RAF1P04049 648 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ARL3P36405 182 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF133P52736 654 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 MLLT11Q13015 90 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 TLDC1Q6P9B6 456 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SPPL2CQ8IUH8 684 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 SGPP2Q8IWX5 399 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RNF170Q96K19 258 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FBXL18Q96ME1 805 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 MTERF1Q99551 399 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 SLC5A7Q9GZV3 580 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FAM53CQ9NYF3 392 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZDHHC3Q9NYG2 299 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 F8W036 122 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 K7EQM0 130 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 M0QZK8 103 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SLC1A7O00341 560 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GGCTO75223 188 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 HNRNPLP14866 589 aaKnown RBP eCLIP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GOT1P17174 413 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PTPRAP18433 802 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 KLRC2P26717 231 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 HOXD12P35452 270 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MTNR1AP48039 350 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF41P51814 821 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 LRP8Q14114 963 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM164Q5U3C3 297 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR2T35Q8NGX2 323 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SLC7A6Q92536 515 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SPTSSAQ969W0 71 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 APOLD1Q96LR9 279 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 NMNAT1Q9HAN9 279 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF736B4DX44 427 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MT-ND4LP03901 98 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RAB3BP20337 219 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF84P51523 738 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RPL23AP62750 156 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PLP2Q04941 152 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 FAM214AQ32MH5 1076 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TRAM1L1Q8N609 369 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 FCRL3Q96P31 734 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ALPK1Q96QP1 1244 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ADAM19Q9H013 955 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR51J1Q9H342 316 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SPACA1Q9HBV2 294 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PREBQ9HCU5 417 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SH2B3Q9UQQ2 575 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 AIFM1O95831 613 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DOK7Q18PE1 504 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CELF3Q5SZQ8 465 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 CD276Q5ZPR3 534 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GPR153Q6NV75 609 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RABEPKQ7Z6M1 372 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 LDB1Q86U70 411 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 KDM8Q8N371 416 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR56B2PQ8NGI1 322 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GNPDA2Q8TDQ7 276 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SIPA1Q96FS4 1042 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 DEFB129Q9H1M3 183 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ZCCHC4Q9H5U6 513 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ISYNA1Q9NPH2 558 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ELOVL2Q9NXB9 296 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 KCNIP1Q9NZI2 227 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TICRRQ7Z2Z1 1910 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 A0A087WWV3 80 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ARL5CA6NH57 179 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM212A6NML5 194 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 AQP9O43315 295 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 RAD1O60671 282 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 AHSA1O95433 338 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 INSRRP14616 1297 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GALNT2Q10471 571 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PAFAH1B3Q15102 231 aaKnown RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 ABLIM2Q6H8Q1 611 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 FAM83HQ6ZRV2 1179 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 SLC29A4Q7RTT9 530 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 FAM185AQ8N0U4 392 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 UBA3Q8TBC4 463 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 HSH2DQ96JZ2 352 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 COG8Q96MW5 612 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GPR174Q9BXC1 333 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TSPAN10Q9H1Z9 355 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GRHPRQ9UBQ7 328 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 TP53TG5Q9Y2B4 290 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 GPR179Q6PRD1 2367 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 OR2F2O95006 317 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MMP7P09237 267 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-204ENST00000455883 PRKACAP17612 351 aa4.99□□□□□ -1.61
CSMD3-204ENST00000455883 MC3RP41968 323 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms