RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 KAT2AQ92830 837 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 CIDECQ96AQ7 238 aaPredicted RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 ERP27Q96DN0 273 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 SPACA9Q96E40 222 aaPredicted RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 SCMH1Q96GD3 660 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 EGLN2Q96KS0 407 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 ZNF681Q96N22 645 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 FRMD6Q96NE9 622 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 OR10A5Q9H207 317 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 REEP4Q9H6H4 257 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 MANSC1Q9H8J5 431 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 TIMMDC1Q9NPL8 285 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 AGPAT4Q9NRZ5 378 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 DDX18Q9NVP1 670 aaKnown RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 ASF1BQ9NVP2 202 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 PNPOQ9NVS9 261 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 NOP53Q9NZM5 478 aaKnown RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 PRODH2Q9UF12 536 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 EIF3LQ9Y262 564 aaKnown RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 CFL2Q9Y281 166 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 DTX4Q9Y2E6 619 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 NTNG1Q9Y2I2 539 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 WBP11Q9Y2W2 641 aaKnown RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 COPG1Q9Y678 874 aaKnown RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 NCKAP5O14513 1909 aa6.54□□□□□ -1.36
COMMD1-205ENST00000455659 USP9YO00507 2555 aaPredicted RBP6.54□□□□□ -1.36
COMMD1-205ENST00000455659 FREM3P0C091 2139 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 GTF3C1Q12789 2109 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 A0A0G2JMM0 328 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 A0A1W2PPB8 328 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 A0A1W2PRS3 328 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 TRPC5OSA6NMA1 111 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 KIR3DP1A8MWS1 328 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 MYO1GB0I1T2 1018 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 SDHDO14521 159 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 KLF11O14901 512 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 HDAC3O15379 428 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 VPS4BO75351 444 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 NADKO95544 446 aaPredicted RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 G6PDP11413 515 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 PRPS2P11908 318 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 EFNA1P20827 205 aaPredicted RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 MPIP34949 423 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 MEOX1P50221 254 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 NR0B1P51843 470 aaKnown RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 NRG3P56975 720 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 GPR85P60893 370 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 PLCXD2Q0VAA5 305 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 DUSP8Q13202 625 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 IGFBP7Q16270 282 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 IL23RQ5VWK5 629 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 RPUSD3Q6P087 351 aaKnown RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 OPN5Q6U736 354 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 IL20RBQ6UXL0 311 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 RTL4Q6ZR62 310 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 R3HCC1LQ7Z5L2 792 aaKnown RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ZNF227Q86WZ6 799 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 CCDC116Q8IYX3 515 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 DND1Q8IYX4 353 aaKnown RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 PRR22Q8IZ63 422 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 TAGAPQ8N103 731 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 CPSF7Q8N684 471 aaKnown RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ZNF615Q8N8J6 731 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ZNF441Q8N8Z8 693 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 GOLM1Q8NBJ4 401 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 GALNT11Q8NCW6 608 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 FAM13CQ8NE31 585 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 C17orf47Q8NEP4 570 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 OR7G2Q8NG99 324 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 OR10G3Q8NGC4 313 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 OR5M3Q8NGP4 307 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 NR4A3Q92570 626 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 CTHRC1Q96CG8 243 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ZBED6CLQ96FA7 236 aaPredicted RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 AMDHD1Q96NU7 426 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 TAAR6Q96RI8 345 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 SLX1AQ9BQ83 275 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 GLIPR2Q9H4G4 154 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 AKTIPQ9H8T0 292 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 TRIM45Q9H8W5 580 aaPredicted RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ANKRA2Q9H9E1 313 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 MEAF6Q9HAF1 191 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 NEUROD4Q9HD90 331 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 INTS9Q9NV88 658 aaKnown RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ATAD3AQ9NVI7 634 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ZNF446Q9NWS9 450 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 ASIC5Q9NY37 505 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 SH3BP4Q9P0V3 963 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 BAIAP2L1Q9UHR4 511 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 VPS4AQ9UN37 437 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 EXO1Q9UQ84 846 aaKnown RBP6.53□□□□□ -1.36
COMMD1-205ENST00000455659 PCDHGB6Q9Y5F9 930 aa6.53□□□□□ -1.36
COMMD1-205ENST00000455659 CACNA1CQ13936 2221 aa6.52□□□□□ -1.37
COMMD1-205ENST00000455659 A0A087WV62 115 aa6.52□□□□□ -1.37
COMMD1-205ENST00000455659 ASPDHA6ND91 283 aa6.52□□□□□ -1.37
COMMD1-205ENST00000455659 FRG2CA6NGY1 282 aa6.52□□□□□ -1.37
COMMD1-205ENST00000455659 CAPN14A8MX76 684 aa6.52□□□□□ -1.37
COMMD1-205ENST00000455659 SLCO1B7G3V0H7 640 aa6.52□□□□□ -1.37
COMMD1-205ENST00000455659 G3V3Y1 287 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms