RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 RAPH1Q70E73 1250 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ADAMTSL2Q86TH1 951 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CCDC25Q86WR0 208 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 MYLK4Q86YV6 388 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF595Q8IYB9 648 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TMEM132CQ8N3T6 1108 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PPM1NQ8N819 430 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ZFP62Q8NB50 900 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 POGLUT1Q8NBL1 392 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CLRN3Q8NCR9 226 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TTLQ8NG68 377 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 OR2M7Q8NG81 312 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 OR5M3Q8NGP4 307 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 LILRB4Q8NHJ6 448 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC2A12Q8TD20 617 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF721Q8TF20 911 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF473Q8WTR7 871 aaKnown RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PHF10Q8WUB8 498 aaKnown RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 NRGNQ92686 78 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 RND1Q92730 232 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 KIAA1191Q96A73 305 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 NXNL1Q96CM4 212 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PTCD3Q96EY7 689 aaKnown RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 UBXN10Q96LJ8 280 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 RUNDC3BQ96NL0 473 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 RASL10BQ96S79 203 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 RBBP8Q99708 897 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CPNE1Q99829 537 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ERP44Q9BS26 406 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CNPPD1Q9BV87 410 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CAPS2Q9BXY5 557 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TTTY12Q9BZ98 90 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ALG9Q9H6U8 611 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 COPS7BQ9H9Q2 264 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ADAP2Q9NPF8 381 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PNPLA3Q9NST1 481 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TUBA8Q9NY65 449 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 GPRC5BQ9NZH0 403 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 COQ3Q9NZJ6 369 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 KLHL14Q9P2G3 628 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TXNDC16Q9P2K2 825 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PPIEQ9UNP9 301 aaKnown RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 NUP214P35658 2090 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 EXPH5Q8NEV8 1989 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A088AWK7 358 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A0G2JNJ9 132 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A1W2PS29 197 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM159BA6NKW6 160 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 KDM4EB2RXH2 506 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SUPT3HB4E1H0 165 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 CCDC188H7C350 402 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 FGF17O60258 216 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SUPT3HO75486 399 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 GLSO94925 669 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 GBAP04062 536 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 P04436 131 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 RFPL3SP0C7P2 107 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC35E2BP0CK96 405 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MTHFD2P13995 350 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF10P21506 573 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SSTR2P30874 369 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SPRP35270 261 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 GP5P40197 560 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MAGEA4P43358 317 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 HNRNPH2P55795 449 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 WNT3P56703 355 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 RAB10P61026 200 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 RPS13P62277 151 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 OCRLQ01968 901 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 FOLH1Q04609 750 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TGM3Q08188 693 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 FOXO1Q12778 655 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 CALCOCO2Q13137 446 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF267Q14586 743 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC10A1Q14973 349 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SLMAPQ14BN4 828 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TERF2Q15554 542 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ELAVL1Q15717 326 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ZKSCAN8Q15776 578 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 PFKFB4Q16877 469 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 KBTBD12Q3ZCT8 623 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 PIGGQ5H8A4 983 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 UBAP2Q5T6F2 1119 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 GRTP1Q5TC63 336 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 PRAMEF20Q5VT98 475 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC22A10Q63ZE4 541 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TMEM211Q6ICI0 200 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 OR4C11Q6IEV9 310 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MED27Q6P2C8 311 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ARHGAP11AQ6P4F7 1023 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 RTL4Q6ZR62 310 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM47EQ6ZV65 393 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 CBLL1Q75N03 491 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TRILQ7L0X0 811 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC22A16Q86VW1 577 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 LIX1LQ8IVB5 337 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 C9orf40Q8IXQ3 194 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 CMIPQ8IY22 773 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 C17orf53Q8N3J3 647 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TCAIMQ8N3R3 496 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms