RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 CRB3Q9BUF7 120 aa15.53■□□□□ 0.08
LINC00963-208ENST00000454968 THUMPD3Q9BV44 507 aaKnown RBP15.53■□□□□ 0.08
LINC00963-208ENST00000454968 GPR87Q9BY21 358 aa15.53■□□□□ 0.08
LINC00963-208ENST00000454968 DDX18Q9NVP1 670 aaKnown RBP15.53■□□□□ 0.08
LINC00963-208ENST00000454968 ADA2Q9NZK5 511 aa15.53■□□□□ 0.08
LINC00963-208ENST00000454968 L3MBTL1Q9Y468 752 aa15.53■□□□□ 0.08
LINC00963-208ENST00000454968 ASPMQ8IZT6 3477 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 MYOCOSA0A1B0GUC4 107 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 ASNA1O43681 348 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 BCAS2O75934 225 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 HMGN2P05204 90 aaKnown RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 ME2P23368 584 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 RBMS1P29558 406 aaKnown RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 SOAT1P35610 550 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 EEF1A2Q05639 463 aaKnown RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 COX20Q5RI15 118 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 AP1ARQ63HQ0 302 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 MFSD12Q6NUT3 480 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 SHISA6Q6ZSJ9 500 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 LANCL3Q6ZV70 420 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 RNF130Q86XS8 419 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 PTOV1Q86YD1 416 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 HPS6Q86YV9 775 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 PRSS58Q8IYP2 241 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 LGI4Q8N135 537 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 ENDOVQ8N8Q3 282 aaKnown RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 NFAM1Q8NET5 270 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 OR10A6Q8NH74 314 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 DAZLQ92904 295 aaKnown RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 NKD1Q969G9 470 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 REXO5Q96IC2 774 aaKnown RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 RAB3IPQ96QF0 476 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 ECSITQ9BQ95 431 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 TMEM121BQ9BXQ6 578 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-208ENST00000454968 TMEM38AQ9H6F2 299 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 ANKRA2Q9H9E1 313 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 GIN1Q9NXP7 522 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 TCFL5Q9UL49 500 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 PADI2Q9Y2J8 665 aa15.52■□□□□ 0.08
LINC00963-208ENST00000454968 C17orf105B2RV13 164 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 ANKRD65E5RJM6 399 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 HRKO00198 91 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 ACOT8O14734 319 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 BRINP1O60477 761 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 SORBS2O94875 1100 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 IGHEP01854 428 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 TCN2P20062 427 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 MMP11P24347 488 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 CHI3L1P36222 383 aaPredicted RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 EMDP50402 254 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 TRIM25Q14258 630 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 PUM1Q14671 1186 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 SPDYE7PQ495Y7 208 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.51■□□□□ 0.073e-7■□□□□ 11
LINC00963-208ENST00000454968 MFSD4BQ5TF39 518 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 MORN4Q8NDC4 146 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 ZNF721Q8TF20 911 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 ASB9Q96DX5 294 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 SENP5Q96HI0 755 aaPredicted RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 VSTM2LQ96N03 204 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 SEMA4CQ9C0C4 833 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 GMPR2Q9P2T1 348 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 PACSIN3Q9UKS6 424 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 POMPQ9Y244 141 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 FARSAQ9Y285 508 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 PTRH2Q9Y3E5 179 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 SAGE2PA6NJ88 616 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 COQ9O75208 318 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 PDE5AO76074 875 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 IFNA16P05015 189 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 SLC37A1P57057 533 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 RBBP4Q09028 425 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 TRAP1Q12931 704 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 BNIP2Q12982 314 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 DNASE1L3Q13609 305 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 TP53BP2Q13625 1128 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 CDC73Q6P1J9 531 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 ZZZ3Q8IYH5 903 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 HORMAD2Q8N7B1 307 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 RNF148Q8N7C7 305 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 OR2T12Q8NG77 320 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 OR52E4Q8NGH9 312 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 PNPT1Q8TCS8 783 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 METTL21AQ8WXB1 218 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 SLC35G5Q96KT7 338 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 ART5Q96L15 291 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 LMF2Q9BU23 707 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 ACTRT3Q9BYD9 372 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 MUC13Q9H3R2 512 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 THSD1Q9NS62 852 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 THUMPD1Q9NXG2 353 aaKnown RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 C19orf25Q9UFG5 118 aaPredicted RBP15.51■□□□□ 0.07
LINC00963-208ENST00000454968 HS3ST3B1Q9Y662 390 aa15.51■□□□□ 0.07
LINC00963-208ENST00000454968 HMGN4O00479 90 aa15.5■□□□□ 0.07
LINC00963-208ENST00000454968 PRAMEF2O60811 474 aa15.5■□□□□ 0.07
LINC00963-208ENST00000454968 SOX30O94993 753 aa15.5■□□□□ 0.07
LINC00963-208ENST00000454968 ARAFP10398 606 aa15.5■□□□□ 0.07
LINC00963-208ENST00000454968 ETFAP13804 333 aa15.5■□□□□ 0.07
LINC00963-208ENST00000454968 F8A1P23610 371 aa15.5■□□□□ 0.07
LINC00963-208ENST00000454968 SSTR4P31391 388 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms