RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 MYPOPQ86VE0 399 aaPredicted RBP3.16□□□□□ -1.9
VPS8-211ENST00000452140 HDDC3Q8N4P3 179 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 COLGALT1Q8NBJ5 622 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 ZNF397Q8NF99 534 aaPredicted RBP3.16□□□□□ -1.9
VPS8-211ENST00000452140 OR4F17Q8NGA8 305 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 FAM222BQ8WU58 562 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 OR4F4Q96R69 305 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 APOOQ9BUR5 198 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 ST6GALNAC5Q9BVH7 336 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 RBM24Q9BX46 236 aaKnown RBP3.16□□□□□ -1.9
VPS8-211ENST00000452140 PUS3Q9BZE2 481 aaKnown RBP3.16□□□□□ -1.9
VPS8-211ENST00000452140 TRIM6Q9C030 488 aaPredicted RBP3.16□□□□□ -1.9
VPS8-211ENST00000452140 NACA2Q9H009 215 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 C1orf21Q9H246 121 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 TMEM231Q9H6L2 316 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 ELL3Q9HB65 397 aaPredicted RBP3.16□□□□□ -1.9
VPS8-211ENST00000452140 SOHLH2Q9NX45 425 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 CNOT2Q9NZN8 540 aaKnown RBP3.16□□□□□ -1.9
VPS8-211ENST00000452140 TUBGCP4Q9UGJ1 667 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 FAM205AQ6ZU69 1335 aa3.16□□□□□ -1.9
VPS8-211ENST00000452140 A0A0A6YYD4 124 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 BCLAF3A2AJT9 711 aaKnown RBP3.15□□□□□ -1.91
VPS8-211ENST00000452140 FOXI3A8MTJ6 420 aaPredicted RBP3.15□□□□□ -1.91
VPS8-211ENST00000452140 CFLARO15519 480 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 PRPSAP2O60256 369 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 RANBP6O60518 1105 aaKnown RBP3.15□□□□□ -1.91
VPS8-211ENST00000452140 MELTFP08582 738 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 GHRP10912 638 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 FOLR2P14207 255 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 GATA1P15976 413 aaPredicted RBP3.15□□□□□ -1.91
VPS8-211ENST00000452140 GATA2P23769 480 aaPredicted RBP3.15□□□□□ -1.91
VPS8-211ENST00000452140 MATKP42679 507 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 SGSHP51688 502 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 SLC7A2P52569 658 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 BPIFB3P59826 476 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 CEBPEQ15744 281 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 ANKRD55Q3KP44 614 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 TCTEX1D4Q5JR98 221 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 NHLRC3Q5JS37 347 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 FAM219BQ5XKK7 198 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 REP15Q6BDI9 236 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 APOOLQ6UXV4 268 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 MOB2Q70IA6 237 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 MRPL43Q8N983 215 aaKnown RBP3.15□□□□□ -1.91
VPS8-211ENST00000452140 OR6T1Q8NGN1 323 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 OR2L2Q8NH16 312 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 ZNF671Q8TAW3 534 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 ITLN1Q8WWA0 313 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 TOMM40LQ969M1 308 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 NTNG2Q96CW9 530 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 GPR174Q9BXC1 333 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 HSD3B7Q9H2F3 369 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 ARMCX1Q9P291 453 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 EMCNQ9ULC0 261 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 PLEKHA6Q9Y2H5 1048 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 RAD54L2Q9Y4B4 1467 aa3.15□□□□□ -1.91
VPS8-211ENST00000452140 PTPRUQ92729 1446 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 A0A0J9YVX5 310 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 CYB561D2O14569 222 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 ARPC1BO15143 372 aaKnown RBP3.14□□□□□ -1.91
VPS8-211ENST00000452140 PDGFBP01127 241 aaPredicted RBP3.14□□□□□ -1.91
VPS8-211ENST00000452140 CCNA2P20248 432 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 PPP2R1BP30154 601 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 CHRNA3P32297 505 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 RFC2P35250 354 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 SAA4P35542 130 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 MAGEA4P43358 317 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 SLC6A8P48029 635 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 MFAP2P55001 183 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 HAND2P61296 217 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 CRMP1Q14194 572 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 ABRAXAS2Q15018 415 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 ZNF699Q32M78 642 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 C14orf28Q4W4Y0 310 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 TOR1AIP1Q5JTV8 583 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 FAM182AQ5T1J6 154 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 IL23RQ5VWK5 629 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 FAM159AQ6UWV7 190 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 ABRAXAS1Q6UWZ7 409 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 TMUB2Q71RG4 321 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 GPBP1Q86WP2 473 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 LRRC49Q8IUZ0 686 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 HSCBQ8IWL3 235 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 CSNK1G2-AS1Q8NCQ2 148 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 OR56B1Q8NGI3 324 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 FCGR1BQ92637 280 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 LHX4Q969G2 390 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 CPXM1Q96SM3 734 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 RAB17Q9H0T7 212 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 FAM124BQ9H5Z6 455 aaPredicted RBP3.14□□□□□ -1.91
VPS8-211ENST00000452140 ALG9Q9H6U8 611 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 ROPN1Q9HAT0 212 aaPredicted RBP3.14□□□□□ -1.91
VPS8-211ENST00000452140 NGBQ9NPG2 151 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 HOOK1Q9UJC3 728 aaKnown RBP3.14□□□□□ -1.91
VPS8-211ENST00000452140 MRPL11Q9Y3B7 192 aaKnown RBP3.14□□□□□ -1.91
VPS8-211ENST00000452140 FKBP7Q9Y680 259 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 CLCA3PQ9Y6N3 262 aa3.14□□□□□ -1.91
VPS8-211ENST00000452140 EI24O14681 340 aa3.13□□□□□ -1.91
VPS8-211ENST00000452140 RASGRF2O14827 1237 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms