RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MAPKAPK3Q16644 382 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 LINC00303Q3SY05 128 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 DNAL1Q4LDG9 190 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 TRMT12Q53H54 448 aaKnown RBP12.12□□□□□ -0.47
VPS33A-202ENST00000451053 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 HACD2Q6Y1H2 254 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 VWA5B2Q8N398 1253 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 DPP10Q8N608 796 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 OR7G2Q8NG99 324 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 OR1N1Q8NGS0 311 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 BRIX1Q8TDN6 353 aaKnown RBP12.12□□□□□ -0.47
VPS33A-202ENST00000451053 PSMF1Q92530 271 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 TTC9Q92623 222 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 VPS33AQ96AX1 596 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 CTHRC1Q96CG8 243 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 ZBED6CLQ96FA7 236 aaPredicted RBP12.12□□□□□ -0.47
VPS33A-202ENST00000451053 VMP1Q96GC9 406 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 ART5Q96L15 291 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 SEMA4CQ9C0C4 833 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 LHPPQ9H008 270 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 ANKRA2Q9H9E1 313 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 SLC52A3Q9NQ40 469 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 ACSS1Q9NUB1 689 aaPredicted RBP12.12□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF639Q9UID6 485 aa12.12□□□□□ -0.47
VPS33A-202ENST00000451053 A0A1W2PRB8 838 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 RNASET2O00584 256 aaKnown RBP12.11□□□□□ -0.47
VPS33A-202ENST00000451053 GYG2O15488 501 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 SCN2BO60939 215 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 KCNH1O95259 989 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 C6orf47O95873 294 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 CBX7O95931 251 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 MC3RP41968 323 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 CDK9P50750 372 aaKnown RBP12.11□□□□□ -0.47
VPS33A-202ENST00000451053 CLCN2P51788 898 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
VPS33A-202ENST00000451053 SLC37A1P57057 533 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 NCALDP61601 193 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 TLR1Q15399 786 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 TRMT5Q32P41 509 aaKnown RBP12.11□□□□□ -0.47
VPS33A-202ENST00000451053 FHL5Q5TD97 284 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 B3GNTL1Q67FW5 361 aaPredicted RBP12.11□□□□□ -0.47
VPS33A-202ENST00000451053 FCRLBQ6BAA4 426 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 TMEM107Q6UX40 140 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 ANKRD46Q86W74 232 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 SIRT6Q8N6T7 355 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 FDCSPQ8NFU4 85 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 ZFP28Q8NHY6 868 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 NPAS2Q99743 824 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 BTBD10Q9BSF8 475 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 LRMDAQ9H2I8 198 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 GPR83Q9NYM4 423 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 COPS7AQ9UBW8 275 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 BTNL2Q9UIR0 455 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
VPS33A-202ENST00000451053 ZFHX4Q86UP3 3567 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 C15orf38-AP3S2A0A0A6YYH1 394 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 PRSS51A0A1B0GVH4 220 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 A8MUI8 341 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 FBP2O00757 339 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 MAN1A2O60476 641 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 NME6O75414 186 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 ERN1O75460 977 aaKnown RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 GPC1P35052 558 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 SOX11P35716 441 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 TRPC1P48995 793 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 AP2B1P63010 937 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 RHDQ02161 417 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 NFYCQ13952 458 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 MYBPC3Q14896 1274 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 MLC1Q15049 377 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 IRAK1BP1Q5VVH5 260 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 JMJD6Q6NYC1 403 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 RNF111Q6ZNA4 994 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 ARPINQ7Z6K5 226 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 DHDDSQ86SQ9 333 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 ARHGAP24Q8N264 748 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF615Q8N8J6 731 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 OR52R1Q8NGF1 315 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 THAP3Q8WTV1 239 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 OR5P2Q8WZ92 322 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 SLC7A6OSQ96CW6 309 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 ELP4Q96EB1 424 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 MAGED4Q96JG8 741 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 HOPXQ9BPY8 73 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 DEFB126Q9BYW3 111 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 TRIM4Q9C037 500 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 OR10A5Q9H207 317 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 ZNF552Q9H707 407 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 SIRT3Q9NTG7 399 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 PTGFRNQ9P2B2 879 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 BCAP29Q9UHQ4 241 aa12.1□□□□□ -0.47
VPS33A-202ENST00000451053 ANKRD11Q6UB99 2663 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-202ENST00000451053 A0A096LPI6 279 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 ASPDHA6ND91 283 aa12.09□□□□□ -0.47
VPS33A-202ENST00000451053 TMEM200CA6NKL6 621 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms