RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ALKBH4Q9NXW9 302 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 MAT2BQ9NZL9 334 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 GRID1Q9ULK0 1009 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 DLGAP4Q9Y2H0 992 aa14.04□□□□□ -0.16
CHD3-205ENST00000449744 ANKRD33BA6NCL7 494 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 H3BQF6 201 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 CRCPO75575 148 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 SNX4O95219 450 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 IL3P08700 152 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 RFPL3SP0C7P2 107 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 DRD2P14416 443 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 S1PR1P21453 382 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 ACVR2AP27037 513 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 TNFRSF8P28908 595 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 CHRNB4P30926 498 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 MASP1P48740 699 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 NUP107P57740 925 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 HMGCS1Q01581 520 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 BTKQ06187 659 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 HEPACAMQ14CZ8 416 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 EXOSC7Q15024 291 aaKnown RBP14.03□□□□□ -0.16
CHD3-205ENST00000449744 IMPG1Q17R60 797 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 CFAP157Q5JU67 520 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 SPDYAQ5MJ70 313 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 FAM180BQ6P0A1 224 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 SCIMPQ6UWF3 145 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 PRR22Q8IZ63 422 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 SAMD14Q8IZD0 417 aaPredicted RBP14.03□□□□□ -0.16
CHD3-205ENST00000449744 RPRMLQ8N4K4 120 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 ADCY4Q8NFM4 1077 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 OR10Q1Q8NGQ4 319 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 CNRIP1Q96F85 164 aaPredicted RBP14.03□□□□□ -0.16
CHD3-205ENST00000449744 APIPQ96GX9 242 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 KCNA7Q96RP8 456 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 NXF5Q9H1B4 397 aaKnown RBP14.03□□□□□ -0.16
CHD3-205ENST00000449744 PROK2Q9HC23 129 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 GIMAP4Q9NUV9 329 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 TNFRSF10DQ9UBN6 386 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 PRODH2Q9UF12 536 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 EMCNQ9ULC0 261 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 RNF6Q9Y252 685 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 ZNF407Q9C0G0 2248 aa14.03□□□□□ -0.16
CHD3-205ENST00000449744 LRRC3CA6NJW4 275 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 FAM90A27PA6NNH2 459 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 FOXO6A8MYZ6 492 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 G3V2L1 256 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 COPEO14579 308 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 WDR1O75083 606 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 PROCP04070 461 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 NAGAP17050 411 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 GDF1P27539 372 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 ABCD3P28288 659 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 TIA1P31483 386 aaKnown RBP eCLIP14.02□□□□□ -0.17
CHD3-205ENST00000449744 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 NAGLUP54802 743 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 DCAF7P61962 342 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 RAE1P78406 368 aaKnown RBP14.02□□□□□ -0.17
CHD3-205ENST00000449744 MGAT2Q10469 447 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 LTB4RQ15722 352 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 NNATQ16517 81 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 TRMT12Q53H54 448 aaKnown RBP14.02□□□□□ -0.17
CHD3-205ENST00000449744 B3GNT6Q6ZMB0 384 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 PACS2Q86VP3 889 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 TDRPQ86YL5 185 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 OR52R1Q8NGF1 315 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 RDH11Q8TC12 318 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 C16orf78Q8WTQ4 265 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.02□□□□□ -0.172e-6■■■■■ 29
CHD3-205ENST00000449744 EXOSC8Q96B26 276 aaKnown RBP14.02□□□□□ -0.17
CHD3-205ENST00000449744 HSPBAP1Q96EW2 488 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 LCORQ96JN0 433 aaPredicted RBP14.02□□□□□ -0.17
CHD3-205ENST00000449744 RILPQ96NA2 401 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 EBPLQ9BY08 206 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 ITPAQ9BY32 194 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 ANGPTL4Q9BY76 406 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 L2HGDHQ9H9P8 463 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 ACKR4Q9NPB9 350 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 HEY2Q9UBP5 337 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 ZNF639Q9UID6 485 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 DTX4Q9Y2E6 619 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 PLLPQ9Y342 182 aa14.02□□□□□ -0.17
CHD3-205ENST00000449744 DNAJC13O75165 2243 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 SERTM1A2A2V5 107 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 PLIN3O60664 434 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 CDH16O75309 829 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 TRIM3O75382 744 aaPredicted RBP14.01□□□□□ -0.17
CHD3-205ENST00000449744 PPM1BO75688 479 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 TRAPPC6AO75865 159 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 BCAS2O75934 225 aaPredicted RBP14.01□□□□□ -0.17
CHD3-205ENST00000449744 ANXA4P09525 319 aaPredicted RBP14.01□□□□□ -0.17
CHD3-205ENST00000449744 GABRA1P14867 456 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 CPA3P15088 417 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 CRHR1P34998 444 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 CASP3P42574 277 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 GSTM5P46439 218 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 TRPC1P48995 793 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 DUSP2Q05923 314 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 C1orf185Q5T7R7 199 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 BICRALQ6AI39 1079 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 NUP54Q7Z3B4 507 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms