RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 C8GP07360 202 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 PYGBP11216 843 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 USF1P22415 310 aaPredicted RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 ARNTP27540 789 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 VPS41P49754 854 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 LHX2P50458 406 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 SESN2P58004 480 aaPredicted RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 CRADDP78560 199 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 REEP5Q00765 189 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 PCDH1Q08174 1060 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 CTBP1Q13363 440 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 ERCC6LQ2NKX8 1250 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 PGGHGQ32M88 737 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 ALKBH2Q6NS38 261 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 CASC4Q6P4E1 433 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 ANGPTL8Q6UXH0 198 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 MTERF4Q7Z6M4 381 aaKnown RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 IFT20Q8IY31 132 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 CPNE9Q8IYJ1 553 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 NAT8LQ8N9F0 302 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 OR56A3Q8NH54 315 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 ZFAND2BQ8WV99 257 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 NEUROG1Q92886 237 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 GCDHQ92947 438 aaPredicted RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 RHBDF1Q96CC6 855 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 LRRC39Q96DD0 335 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 ADAD1Q96M93 576 aaKnown RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 SERINC2Q96SA4 455 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 TRAF4Q9BUZ4 470 aaPredicted RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 GRIP2Q9C0E4 1043 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 CCDC68Q9H2F9 335 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 EML4Q9HC35 981 aaKnown RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 HEY2Q9UBP5 337 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 V9GYY5 206 aaPredicted RBP11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 LRIT2A6NDA9 550 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 HRKO00198 91 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 CDC7O00311 574 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 EIF3HO15372 352 aaKnown RBP eCLIP11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 CD3EP07766 207 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 ZSCAN5DPP0CG00 497 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 ETS1P14921 441 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 OGNP20774 298 aaKnown RBP11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 IVDP26440 423 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 HNRNPH1P31943 449 aaKnown RBP11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 PLA2G16P53816 162 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 ACTG1P63261 375 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 SETDB1Q15047 1291 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 MIDNQ504T8 468 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 AAGABQ6PD74 315 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 CENPUQ71F23 418 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 IFNEQ86WN2 208 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 PDIK1LQ8N165 341 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 RDH11Q8TC12 318 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 CCT6BQ92526 530 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 FAM168AQ92567 244 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 PROX1Q92786 737 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 KCNJ9Q92806 393 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 PPWD1Q96BP3 646 aaKnown RBP11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 MFSD3Q96ES6 412 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 TSNARE1Q96NA8 513 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 DGAT2Q96PD7 388 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 GPR21Q99679 349 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 NAT9Q9BTE0 207 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 LRRC1Q9BTT6 524 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 WWTR1Q9GZV5 400 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 IL22Q9GZX6 179 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 ZNF696Q9H7X3 374 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 MANSC1Q9H8J5 431 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 PELI2Q9HAT8 420 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 DNAJC11Q9NVH1 559 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 B3GALT5Q9Y2C3 310 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 MED16Q9Y2X0 877 aa11.32□□□□□ -0.6
AC004540.1-204ENST00000449537 CBR3O75828 277 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 RHOXF2BP0C7M4 288 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 ZNF708P17019 499 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 MAGEA3P43357 314 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 STT3AP46977 705 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 TMED10P49755 219 aaKnown RBP11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 GFRA1P56159 465 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 ARL4CP56559 192 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 CLDN18P56856 261 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 GUCY2DQ02846 1103 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 LRRC8EQ6NSJ5 796 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 NXPE4Q6UWF7 544 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 CES3Q6UWW8 571 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 STAC2Q6ZMT1 411 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 CNPY4Q8N129 248 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 PLD6Q8N2A8 252 aaKnown RBP11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 TP53INP1Q96A56 240 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 MSI2Q96DH6 328 aaKnown RBP11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 FBXL20Q96IG2 436 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 RHOXF2Q9BQY4 288 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 OR2B2Q9GZK3 357 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 ACTR6Q9GZN1 396 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 ACTR8Q9H981 624 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 FANCFQ9NPI8 374 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms