RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ITLN2Q8WWU7 325 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 CCDC120Q96HB5 630 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 FCRL1Q96LA6 429 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 GAL3ST4Q96RP7 486 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 MECRQ9BV79 373 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 TTTY12Q9BZ98 90 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 NXF5Q9H1B4 397 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 DEFB127Q9H1M4 99 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 IL1RL2Q9HB29 575 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 RRAGDQ9NQL2 400 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 SLC35C2Q9NQQ7 365 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 TUBA8Q9NY65 449 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 CNIH4Q9P003 139 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 DNAJC15Q9Y5T4 150 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 NPFFR2Q9Y5X5 522 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 PTGDR2Q9Y5Y4 395 aa12.95□□□□□ -0.34
RTFDC1-204ENST00000449062 CACNA1DQ01668 2161 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 A0A1B0GTH9 108 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 TFECO14948 347 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 P04436 131 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 CHRNGP07510 517 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 PCSK2P16519 638 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 NAGAP17050 411 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 DDCP20711 480 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 TACR1P25103 407 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 GSTM5P46439 218 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 ALDH9A1P49189 494 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 ADORA2A-AS1P86434 159 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 MPP2Q14168 576 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 HEPACAMQ14CZ8 416 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 CES4AQ5XG92 561 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 KANK2Q63ZY3 851 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 TAGAPQ8N103 731 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 FBXW8Q8N3Y1 598 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 ERP27Q96DN0 273 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 EGLN2Q96KS0 407 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 DMRTA2Q96SC8 542 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 EBPLQ9BY08 206 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 MYNNQ9NPC7 610 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 GPR55Q9Y2T6 319 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 TRAF6Q9Y4K3 522 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 ZNF780BQ9Y6R6 833 aa12.94□□□□□ -0.34
RTFDC1-204ENST00000449062 LRBAP50851 2863 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 LRRC3CA6NJW4 275 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 FAM166BA8MTA8 275 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 TO15178 435 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 PLOD3O60568 738 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 TRIM3O75382 744 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 PDE9AO76083 593 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 TUBBP07437 444 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 BPGMP07738 259 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 ABCB1P08183 1280 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 CELA3AP09093 270 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 RFPL3SP0C7P2 107 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 DRD5P21918 477 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 PPICP45877 212 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 FBXW4P57775 412 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 MRPS35P82673 323 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 ZNF763Q0D2J5 394 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 C2orf80Q0P641 193 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 FNDC7Q5VTL7 733 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 GK5Q6ZS86 529 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 FAM47EQ6ZV65 393 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 EXOC3L1Q86VI1 746 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 SAMD14Q8IZD0 417 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 CLYBLQ8N0X4 340 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 FAM57AQ8TBR7 257 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 SPPL2AQ8TCT8 520 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 EXOSC8Q96B26 276 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 SMC6Q96SB8 1091 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 BRINP2Q9C0B6 783 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 ANKRA2Q9H9E1 313 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 MEMO1Q9Y316 297 aa12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 NCOA6Q14686 2063 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-204ENST00000449062 TMEM233B4DJY2 109 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 E9PLN8 166 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 SLC28A1O00337 649 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 SEC22BO75396 215 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 NME6O75414 186 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 DHRS4L1P0CG22 281 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 CT45A8P0DMV1 189 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 CT45A9P0DMV2 189 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 ABCD3P28288 659 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 PTGS2P35354 604 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 MAGEA5P43359 124 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 KRT71Q3SY84 523 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 RFTN2Q52LD8 501 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 CT45A2Q5DJT8 189 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 HLA-DQA1Q5Y7H0 255 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 DESI1Q6ICB0 168 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 MTFR2Q6P444 385 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 ARHGAP11AQ6P4F7 1023 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 ZCCHC23Q6ZST2 131 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 TRILQ7L0X0 811 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 SLC22A16Q86VW1 577 aa12.92□□□□□ -0.34
RTFDC1-204ENST00000449062 TICAM1Q8IUC6 712 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms