RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 HNRNPCL2B2RXH8 293 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 HNRNPCL3B7ZW38 293 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 FAM227AF5H4B4 570 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 M0R296 226 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 LDB3O75112 727 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 RDH16O75452 317 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 ATP1B1P05026 303 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 HNRNPCL4P0DMR1 293 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 GABRA4P48169 554 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 HLCSP50747 726 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 RPS6KA3P51812 740 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 GFERP55789 205 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 RAB38P57729 211 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 GANABQ14697 944 aaKnown RBP16.6■□□□□ 0.25
LMNA-208ENST00000448611 MEP1AQ16819 746 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 RBM48Q5RL73 367 aaKnown RBP16.6■□□□□ 0.25
LMNA-208ENST00000448611 MFSD12Q6NUT3 480 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 COMTD1Q86VU5 262 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 TTC29Q8NA56 475 aaPredicted RBP16.6■□□□□ 0.25
LMNA-208ENST00000448611 OR4D11Q8NGI4 311 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 OR9A4Q8NGU2 314 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 TANKQ92844 425 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 WFDC6Q9BQY6 131 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 GABARAPL3Q9BY60 117 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 YIPF3Q9GZM5 350 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 RLIMQ9NVW2 624 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 PTGFRNQ9P2B2 879 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 NDRG4Q9ULP0 352 aaKnown RBP16.6■□□□□ 0.25
LMNA-208ENST00000448611 A8MVJ9 347 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 PCDH17O14917 1159 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 B4GAT1O43505 415 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 NME6O75414 186 aaPredicted RBP16.6■□□□□ 0.25
LMNA-208ENST00000448611 GADD45GO95257 159 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 MED26O95402 600 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 GPR75O95800 540 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 ANXA8P13928 327 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 IL7RP16871 459 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 EPHA2P29317 976 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 NPRL3Q12980 569 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 C6orf141Q5SZD1 244 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 FHL5Q5TD97 284 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 TCTN3Q6NUS6 607 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 MAMSTRQ6ZN01 415 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 SIMC1Q8NDZ2 872 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 ZNF285Q96NJ3 590 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 MYCBPQ99417 103 aaPredicted RBP16.6■□□□□ 0.25
LMNA-208ENST00000448611 PSD2Q9BQI7 771 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 SPATA5L1Q9BVQ7 753 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 RAB33BQ9H082 229 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 LIPT1Q9Y234 373 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 RNF215Q9Y6U7 377 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 SPAG17Q6Q759 2223 aa16.6■□□□□ 0.25
LMNA-208ENST00000448611 A0A1B0GVT2 93 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 EPPINO95925 133 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 CRHBPP24387 322 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 EPHA4P54764 986 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 CNPY1Q3B7I2 92 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 GPAT3Q53EU6 434 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 TRMT12Q53H54 448 aaKnown RBP16.59■□□□□ 0.25
LMNA-208ENST00000448611 RBM44Q6ZP01 1051 aaKnown RBP16.59■□□□□ 0.25
LMNA-208ENST00000448611 RBM45Q8IUH3 476 aaKnown RBP16.59■□□□□ 0.25
LMNA-208ENST00000448611 LACC1Q8IV20 430 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 SLC35A4Q96G79 324 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 TGM7Q96PF1 710 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 TRNT1Q96Q11 434 aaKnown RBP16.59■□□□□ 0.25
LMNA-208ENST00000448611 PITX2Q99697 317 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 SLC38A1Q9H2H9 487 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 GIN1Q9NXP7 522 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 RHCGQ9UBD6 479 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 EPHA6Q9UF33 1036 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 DSPPQ9NZW4 1301 aa16.59■□□□□ 0.25
LMNA-208ENST00000448611 TLCD2A6NGC4 264 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 RHPN2P1A8MT19 583 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 CHST10O43529 356 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 FOXS1O43638 330 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 HOXA6P31267 233 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 HEPHL1Q6MZM0 1159 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 CDC73Q6P1J9 531 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 BORAQ6PGQ7 559 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 TSSK4Q6SA08 328 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 WDR53Q7Z5U6 358 aaPredicted RBP16.58■□□□□ 0.25
LMNA-208ENST00000448611 SLC16A11Q8NCK7 471 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 SETD9Q8NE22 299 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 VANGL1Q8TAA9 524 aaPredicted RBP16.58■□□□□ 0.25
LMNA-208ENST00000448611 ANKRD9Q96BM1 317 aaPredicted RBP16.58■□□□□ 0.25
LMNA-208ENST00000448611 DGCR14Q96DF8 476 aaKnown RBP16.58■□□□□ 0.25
LMNA-208ENST00000448611 CHRNA10Q9GZZ6 450 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 ADNPQ9H2P0 1102 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 ERVMER34-1Q9H9K5 563 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 ACAD8Q9UKU7 415 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 C19orf53Q9UNZ5 99 aaPredicted RBP16.58■□□□□ 0.25
LMNA-208ENST00000448611 GMPPBQ9Y5P6 360 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 HSPE1-MOB4S4R3N1 261 aa16.58■□□□□ 0.25
LMNA-208ENST00000448611 A0A0A6YYC8 382 aaPredicted RBP16.58■□□□□ 0.24
LMNA-208ENST00000448611 IGHV5-51A0A0C4DH38 117 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 ARRDC5A6NEK1 342 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 DUXAA6NLW8 204 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 I3L1I5 382 aaPredicted RBP16.58■□□□□ 0.24
LMNA-208ENST00000448611 AGXTP21549 392 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 FAM214AQ32MH5 1076 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms